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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 2
  • nucleus 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G100700.1 Wheat cytosol, mitochondrion, nucleus, plastid 82.42 83.95
TraesCS6B01G375600.1 Wheat plastid 40.61 38.62
TraesCS3B01G053300.1 Wheat plastid 23.64 38.24
TraesCS6B01G375700.1 Wheat plastid 38.18 35.59
TraesCS7B01G147600.1 Wheat plastid 21.21 30.7
TraesCS3B01G079100.1 Wheat cytosol, endoplasmic reticulum, nucleus 26.67 27.08
EES02585 Sorghum cytosol, nucleus, plastid 26.36 26.77
TraesCS7B01G351200.1 Wheat cytosol, nucleus, plastid 24.55 26.3
TraesCS3B01G079000.1 Wheat cytosol, nucleus, plastid 24.24 25.72
TraesCS4B01G109100.1 Wheat cytosol, nucleus, plasma membrane 21.21 25.36
TraesCS7B01G040200.1 Wheat cytosol 24.24 25.32
TraesCS7B01G030300.1 Wheat plastid 24.24 24.84
TraesCS3B01G028800.1 Wheat cytosol, nucleus, peroxisome 24.85 24.62
TraesCS3B01G026900.1 Wheat nucleus 23.64 24.38
TraesCS3B01G054300.1 Wheat nucleus, peroxisome, plastid 24.24 24.32
TraesCS3B01G054000.1 Wheat cytosol 23.03 24.28
TraesCS3B01G030800.1 Wheat nucleus, plasma membrane, plastid 21.21 23.89
TraesCS3B01G028000.1 Wheat mitochondrion 19.09 23.86
TraesCS3B01G027500.1 Wheat cytosol, endoplasmic reticulum, nucleus 22.12 23.25
TraesCS5B01G187100.1 Wheat cytosol, nucleus, plastid 19.39 23.19
OQU88982 Sorghum plastid 17.58 23.02
TraesCS3B01G027400.1 Wheat nucleus, peroxisome, plastid 21.52 22.9
TraesCS3B01G055200.1 Wheat nucleus, plasma membrane, plastid 20.3 22.87
TraesCS4B01G105700.1 Wheat cytosol, nucleus, peroxisome 33.94 22.81
OQU86433 Sorghum cytosol, nucleus, plastid 24.55 22.69
TraesCS7B01G197600.1 Wheat cytosol 17.27 22.44
TraesCS3B01G028400.1 Wheat nucleus, peroxisome, plastid 22.73 22.26
TraesCS3B01G030900.1 Wheat cytosol, nucleus, plasma membrane 21.52 22.12
TraesCS3B01G030700.1 Wheat nucleus, peroxisome, plastid 20.91 21.5
TraesCS3B01G031300.1 Wheat nucleus, plasma membrane, plastid 21.21 21.15
TraesCS3B01G054800.1 Wheat nucleus, peroxisome, plastid 20.91 21.1
TraesCS3B01G031000.1 Wheat nucleus, plasma membrane, plastid 20.91 21.1
TraesCS3B01G054900.1 Wheat nucleus, peroxisome, plastid 20.91 21.1
TraesCS3B01G055100.1 Wheat cytosol, nucleus, peroxisome 20.91 21.1
TraesCS3B01G054200.1 Wheat nucleus, peroxisome, plastid 21.21 21.08
TraesCS3B01G055000.1 Wheat nucleus, peroxisome, plastid 20.61 20.8
TraesCS3B01G055300.1 Wheat cytosol, nucleus, peroxisome 20.3 20.49
TraesCS3B01G027000.1 Wheat cytosol, nucleus, plastid 21.82 20.17
OQU86440 Sorghum nucleus, plasma membrane, plastid 19.09 18.75
TraesCS3B01G572900.1 Wheat cytosol 19.7 17.96
TraesCS3B01G573000.1 Wheat cytosol 17.27 17.87
TraesCS3B01G079200.1 Wheat cytosol, plastid 31.21 17.34
TraesCS3B01G018200.1 Wheat plastid 22.73 17.16
TraesCS3B01G018100.1 Wheat nucleus, peroxisome, plasma membrane 23.03 11.18
TraesCS1B01G344300.1 Wheat nucleus 23.03 8.92
Protein Annotations
Gene3D:3.30.40.10MapMan:35.2GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006511GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0008270GO:GO:0009056GO:GO:0009987GO:GO:0019538InterPro:IPR008974
InterPro:IPR013010InterPro:IPR013083PFscan:PS51081PANTHER:PTHR10315PANTHER:PTHR10315:SF46InterPro:SINA-like
SUPFAM:SSF49599InterPro:TRAF-likeEnsemblPlantsGene:TraesCS3B01G116800EnsemblPlants:TraesCS3B01G116800.1InterPro:Znf_RING/FYVE/PHDInterPro:Znf_SIAH
SEG:seg:::::
Description
No Description!
Coordinates
chr3B:-:83834542..83835769
Molecular Weight (calculated)
34630.4 Da
IEP (calculated)
6.433
GRAVY (calculated)
-0.054
Length
330 amino acids
Sequence
(BLAST)
001: MGGKRKDTVD GKTPLLKGRP GRKSVPAPSP AAVDAPALAA SGVKVLAGGA VAVAGAEGEV VKLLDSDVPK TVLRCDECHG PLKPPVYQCS RMHPVACGDC
101: GGGGGGGGGE CRPCAGLAAS AVYVQNAYLD TLFGYTKVAC PYRKHGCASS VAYRDAAVHA AACACAPCSC PECLLEGSPA DLVRHLTEES GRHAWGARKI
201: TYGTAHQYVF DELDSEEICE ELLVAEEDDG VFLLHIHRVE LYHHVALACV RNKAAAGPVY SSSVAVEGPP AKGLVVKLET KVVASCPAPT ELVYDDYEAL
301: SVLPRMLHER DESRELHVRV CVSKTQSISE
Best Arabidopsis Sequence Match ( AT5G37870.1 )
(BLAST)
001: MVGVLLSERN GSQKRHCSSI SSDDGRKRVD KTRSAMLTDL DILDCPICYQ ALKIPVFQCG NGHLACSSCC PKLRNKCPAC ALPVGHIRCR AMERVLESVL
101: VPCRYADLGC TKTIYYGRES THEKICNFSP CSCPVQGCNY TGSYKDLYEH YDLTHSTGST AYSFNGVSYI AAMMFISDKI LIERVYEKKL LFVVQCFEEP
201: CGVYVSVSCI APSAPEVGEF SYGLLYTTWE GVTMTYQSPK VKKVLKVSSQ RPKDSFMLIP HSLLCGPLLG MMLCINELKQ M
Arabidopsis Description
Putative E3 ubiquitin-protein ligase SINA-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKD9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.