Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G505500.1 | Wheat | cytosol | 91.85 | 91.85 |
| TraesCS3B01G572900.1 | Wheat | cytosol | 43.26 | 38.12 |
| TraesCS7B01G040200.1 | Wheat | cytosol | 32.92 | 33.23 |
| TraesCS7B01G351200.1 | Wheat | cytosol, nucleus, plastid | 30.09 | 31.17 |
| TraesCS3B01G027000.1 | Wheat | cytosol, nucleus, plastid | 34.8 | 31.09 |
| TraesCS3B01G027500.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 29.47 | 29.94 |
| TraesCS3B01G026900.1 | Wheat | nucleus | 29.78 | 29.69 |
| TraesCS3B01G030800.1 | Wheat | nucleus, plasma membrane, plastid | 25.08 | 27.3 |
| TraesCS3B01G031300.1 | Wheat | nucleus, plasma membrane, plastid | 27.27 | 26.28 |
| TraesCS3B01G055200.1 | Wheat | nucleus, plasma membrane, plastid | 23.82 | 25.94 |
| TraesCS7B01G147600.1 | Wheat | plastid | 18.5 | 25.88 |
| TraesCS4B01G109100.1 | Wheat | cytosol, nucleus, plasma membrane | 21.94 | 25.36 |
| TraesCS3B01G054200.1 | Wheat | nucleus, peroxisome, plastid | 26.33 | 25.3 |
| TraesCS3B01G030900.1 | Wheat | cytosol, nucleus, plasma membrane | 25.39 | 25.23 |
| TraesCS3B01G031000.1 | Wheat | nucleus, plasma membrane, plastid | 25.71 | 25.08 |
| TraesCS3B01G028400.1 | Wheat | nucleus, peroxisome, plastid | 26.33 | 24.93 |
| TraesCS3B01G055000.1 | Wheat | nucleus, peroxisome, plastid | 25.39 | 24.77 |
| TraesCS3B01G055300.1 | Wheat | cytosol, nucleus, peroxisome | 25.39 | 24.77 |
| TraesCS3B01G079000.1 | Wheat | cytosol, nucleus, plastid | 24.14 | 24.76 |
| TraesCS3B01G079100.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 25.08 | 24.62 |
| TraesCS3B01G030700.1 | Wheat | nucleus, peroxisome, plastid | 24.76 | 24.61 |
| EES00395 | Sorghum | cytosol, nucleus, plastid | 26.33 | 24.56 |
| TraesCS3B01G054800.1 | Wheat | nucleus, peroxisome, plastid | 25.08 | 24.46 |
| TraesCS3B01G054900.1 | Wheat | nucleus, peroxisome, plastid | 25.08 | 24.46 |
| TraesCS7B01G030300.1 | Wheat | plastid | 24.14 | 23.91 |
| Zm00001d008514_P001 | Maize | cytosol, nucleus, plastid | 25.08 | 23.74 |
| TraesCS3B01G028800.1 | Wheat | cytosol, nucleus, peroxisome | 24.76 | 23.72 |
| Os01t0121950-00 | Rice | cytosol, endoplasmic reticulum, nucleus | 27.27 | 23.71 |
| TraesCS3B01G027400.1 | Wheat | nucleus, peroxisome, plastid | 22.88 | 23.55 |
| TraesCS3B01G055100.1 | Wheat | cytosol, nucleus, peroxisome | 23.82 | 23.24 |
| TraesCS3B01G053300.1 | Wheat | plastid | 14.73 | 23.04 |
| KXG32022 | Sorghum | nucleus | 24.14 | 22.85 |
| TraesCS3B01G054300.1 | Wheat | nucleus, peroxisome, plastid | 23.2 | 22.49 |
| TraesCS5B01G187100.1 | Wheat | cytosol, nucleus, plastid | 19.44 | 22.46 |
| TraesCS3B01G054000.1 | Wheat | cytosol | 21.63 | 22.04 |
| KXG32016 | Sorghum | cytosol | 19.75 | 19.57 |
| TraesCS3B01G028000.1 | Wheat | mitochondrion | 15.99 | 19.32 |
| TraesCS7B01G197600.1 | Wheat | cytosol | 14.42 | 18.11 |
| TraesCS3B01G116800.1 | Wheat | cytosol | 17.87 | 17.27 |
| TraesCS6B01G375600.1 | Wheat | plastid | 18.5 | 17.0 |
| TraesCS6B01G375700.1 | Wheat | plastid | 17.87 | 16.1 |
| TraesCS3B01G018200.1 | Wheat | plastid | 20.69 | 15.1 |
| TraesCS4B01G105700.1 | Wheat | cytosol, nucleus, peroxisome | 19.44 | 12.63 |
| TraesCS3B01G018100.1 | Wheat | nucleus, peroxisome, plasma membrane | 23.2 | 10.88 |
| TraesCS3B01G079200.1 | Wheat | cytosol, plastid | 19.12 | 10.27 |
| TraesCS1B01G344300.1 | Wheat | nucleus | 21.94 | 8.22 |
Protein Annotations
| MapMan:35.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006511 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR008974 | PANTHER:PTHR10315 | PANTHER:PTHR10315:SF33 |
| InterPro:SINA-like | SUPFAM:SSF49599 | InterPro:TRAF-like | EnsemblPlantsGene:TraesCS3B01G573000 | EnsemblPlants:TraesCS3B01G573000.1 | SEG:seg |
Description
No Description!
Coordinates
chr3B:+:804008796..804009926
Molecular Weight (calculated)
33849.6 Da
IEP (calculated)
6.716
GRAVY (calculated)
-0.195
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHGSSGDGG CAGDGDLAVV PVEAKPQPQP QRQPALDGPP FLIFEKCREP ELLDCHACHL PLKPPIFACD EGHLMCSSCR GAHGEDCGRV AAHCRLADAY
101: AGAVKLPCDY VKFGCEAGLV GPGGGDGGCD FSGSRQMLLD HISTEHSRPV IVVRYGQPGK LSLPLTRRWH VLLGEEDMAD RQRNVFLLVL AERDKGAAVS
201: MVCVRADEGA PAVPQFSYKL TVEHAGSGAR VTFELPVMTF SSLPGGTPWP DEVTSLYVPK AYLSGDAVPL GLHIDKLVPP LLPPPSDTTP PAPATAAVFK
301: FTGTDQGNKK RKSSNPRKL
101: AGAVKLPCDY VKFGCEAGLV GPGGGDGGCD FSGSRQMLLD HISTEHSRPV IVVRYGQPGK LSLPLTRRWH VLLGEEDMAD RQRNVFLLVL AERDKGAAVS
201: MVCVRADEGA PAVPQFSYKL TVEHAGSGAR VTFELPVMTF SSLPGGTPWP DEVTSLYVPK AYLSGDAVPL GLHIDKLVPP LLPPPSDTTP PAPATAAVFK
301: FTGTDQGNKK RKSSNPRKL
001: MVGAAILESP GEGIGSNSIL SQKRQLSSSD AAKRDAKKRS TMLMDLEILD CPICYEAFTI PIFQCDNGHL ACSSCCPKLN NKCPACTSPV GHNRCRAMES
101: VLESILIPCP NAKLGCKKNV SYGKELTHEK ECMFSHCACP ALDCNYTSSY KDLYTHYRIT HMEINQINTF ICDIPLSVRM NISKKILIRT EHLTNHLFAV
201: QCFREPYGVY VTVSCIAPSS PELSQYSYAL SYTVDGHTVI YQSPEVKRVL KLSFQTPQEN FMLIPNSLLR GDVLEMRISV KKLNKE
101: VLESILIPCP NAKLGCKKNV SYGKELTHEK ECMFSHCACP ALDCNYTSSY KDLYTHYRIT HMEINQINTF ICDIPLSVRM NISKKILIRT EHLTNHLFAV
201: QCFREPYGVY VTVSCIAPSS PELSQYSYAL SYTVDGHTVI YQSPEVKRVL KLSFQTPQEN FMLIPNSLLR GDVLEMRISV KKLNKE
Arabidopsis Description
E3 ubiquitin-protein ligase SINA-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKD7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.