Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG32022 | Sorghum | nucleus | 58.07 | 55.49 |
| EES00395 | Sorghum | cytosol, nucleus, plastid | 41.3 | 38.89 |
| TraesCSU01G177200.1 | Wheat | cytosol, nucleus, plastid | 25.78 | 37.39 |
| TraesCS3A01G021100.2 | Wheat | cytosol, nucleus, plastid | 25.78 | 37.39 |
| TraesCSU01G040300.1 | Wheat | cytosol, nucleus, plastid | 25.78 | 37.39 |
| TraesCS1D01G296000.1 | Wheat | nucleus, plasma membrane, plastid | 26.71 | 36.44 |
| TraesCS7B01G040200.1 | Wheat | cytosol | 33.23 | 33.86 |
| TraesCS7A01G138000.1 | Wheat | nucleus | 32.92 | 33.54 |
| Os01t0121950-00 | Rice | cytosol, endoplasmic reticulum, nucleus | 37.58 | 32.97 |
| HORVU3Hr1G005430.1 | Barley | plastid | 25.78 | 32.94 |
| TraesCS7B01G351200.1 | Wheat | cytosol, nucleus, plastid | 31.06 | 32.47 |
| HORVU7Hr1G101970.2 | Barley | cytosol, endoplasmic reticulum, nucleus | 31.68 | 32.38 |
| TraesCS7D01G440300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 31.68 | 32.28 |
| TraesCS3D01G017100.1 | Wheat | cytosol, nucleus, plastid | 31.68 | 32.08 |
| TraesCS3B01G026900.1 | Wheat | nucleus | 31.68 | 31.88 |
| TraesCS7A01G451200.1 | Wheat | cytosol, nucleus, plastid | 31.37 | 31.86 |
| TraesCS3A01G028800.1 | Wheat | cytosol, nucleus, plastid | 30.75 | 30.94 |
| TraesCSU01G046100.1 | Wheat | cytosol | 29.81 | 30.48 |
| TraesCS3B01G027500.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 29.5 | 30.25 |
| TraesCS3A01G028900.1 | Wheat | cytosol, nucleus, plastid | 32.61 | 29.75 |
| TraesCS3D01G016800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 28.88 | 29.62 |
| TraesCSU01G050700.1 | Wheat | cytosol, nucleus, plastid | 31.99 | 28.85 |
| TraesCS3B01G027000.1 | Wheat | cytosol, nucleus, plastid | 31.99 | 28.85 |
| TraesCS3D01G017000.1 | Wheat | cytosol, nucleus, plastid | 32.3 | 28.49 |
| OQU88982 | Sorghum | plastid | 21.43 | 27.38 |
| KXG32025 | Sorghum | cytosol | 25.78 | 26.6 |
| EES00397 | Sorghum | plastid | 26.09 | 26.09 |
| EES00400 | Sorghum | cytosol | 26.09 | 25.61 |
| EES02585 | Sorghum | cytosol, nucleus, plastid | 25.47 | 25.23 |
| OQU86430 | Sorghum | cytosol, nucleus, plastid | 20.5 | 25.0 |
| OQU86433 | Sorghum | cytosol, nucleus, plastid | 26.71 | 24.09 |
| TraesCS3D01G512700.1 | Wheat | cytosol | 26.4 | 23.68 |
| TraesCS3B01G572900.1 | Wheat | cytosol | 26.4 | 23.48 |
| TraesCS3A01G505400.1 | Wheat | cytosol | 26.09 | 23.4 |
| OQU86440 | Sorghum | nucleus, plasma membrane, plastid | 22.67 | 21.73 |
| TraesCS2A01G361500.1 | Wheat | cytosol | 20.19 | 20.57 |
| TraesCS3B01G573000.1 | Wheat | cytosol | 19.57 | 19.75 |
| TraesCS3A01G505500.1 | Wheat | cytosol | 19.25 | 19.44 |
| TraesCS7D01G071600.1 | Wheat | cytosol | 28.57 | 13.61 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | InterPro:7-in-absentia-prot_TRAF-dom | UniProt:A0A1B6Q261 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0006511 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR008974 | InterPro:IPR013010 |
| InterPro:IPR013083 | EnsemblPlants:KXG32016 | ProteinID:KXG32016 | ProteinID:KXG32016.2 | PFAM:PF03145 | PFscan:PS51081 |
| PANTHER:PTHR10315 | PANTHER:PTHR10315:SF33 | InterPro:SINA-like | EnsemblPlantsGene:SORBI_3003G091001 | SUPFAM:SSF49599 | InterPro:TRAF-like |
| UniParc:UPI0009DC9145 | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_SIAH | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:-:7930354..7931387
Molecular Weight (calculated)
34597.7 Da
IEP (calculated)
7.717
GRAVY (calculated)
0.057
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSQQQQKEQ DGELANGAKK SRALAIIDGV LKQEQRGQRE ETRQAKGALV AEVQAVEEPQ INIRMAISPL HCHACVLPLK PPIFKVSCSC SSSLFEAKIC
101: SCWIDLILET LAFCFGSQCE AGHVVCGACR GSHVQVCANA GAGAGTYVHC AELDRIVHDA RVPCAYEKYG CTSWVVYYEA LGHQRSCRFA PCCLCPDPGS
201: GCGRFTSPAS LAEHFIHHGW HVTEVDYAKP CKLAVPGHQV KQVQVGKADG CVFLMLSCAL GAATAVSLVC VRAQVAGNKE NVAMVTFLVA STDLVGGYPA
301: IDQGMFWGFR RRCCTTSPAS RP
101: SCWIDLILET LAFCFGSQCE AGHVVCGACR GSHVQVCANA GAGAGTYVHC AELDRIVHDA RVPCAYEKYG CTSWVVYYEA LGHQRSCRFA PCCLCPDPGS
201: GCGRFTSPAS LAEHFIHHGW HVTEVDYAKP CKLAVPGHQV KQVQVGKADG CVFLMLSCAL GAATAVSLVC VRAQVAGNKE NVAMVTFLVA STDLVGGYPA
301: IDQGMFWGFR RRCCTTSPAS RP
001: MAPGGSALKE VMESNSTGMD YEVKTAKVEV NNNKPTKPGS AGIGKYGIHS NNGVYELLEC PVCTNLMYPP IHQCPNGHTL CSNCKLRVQN TCPTCRYELG
101: NIRCLALEKV AESLEVPCRY QNLGCHDIFP YYSKLKHEQH CRFRPYTCPY AGSECSVTGD IPTLVVHLKD DHKVDMHDGC TFNHRYVKSN PHEVENATWM
201: LTVKLSFDMF SSFYQRFLI
101: NIRCLALEKV AESLEVPCRY QNLGCHDIFP YYSKLKHEQH CRFRPYTCPY AGSECSVTGD IPTLVVHLKD DHKVDMHDGC TFNHRYVKSN PHEVENATWM
201: LTVKLSFDMF SSFYQRFLI
Arabidopsis Description
SINAT2E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:A0A178VHN9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.