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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G138000.1 Wheat nucleus 92.72 92.72
TraesCS7B01G351200.1 Wheat cytosol, nucleus, plastid 77.22 79.22
TraesCS3B01G026900.1 Wheat nucleus 77.22 76.25
TraesCS3B01G027500.1 Wheat cytosol, endoplasmic reticulum, nucleus 71.52 71.97
TraesCS3B01G027000.1 Wheat cytosol, nucleus, plastid 59.49 52.66
Zm00001d008514_P001 Maize cytosol, nucleus, plastid 41.77 39.17
TraesCS3B01G572900.1 Wheat cytosol 44.62 38.95
EES00395 Sorghum cytosol, nucleus, plastid 41.46 38.3
Os01t0121950-00 Rice cytosol, endoplasmic reticulum, nucleus 44.3 38.15
KXG32022 Sorghum nucleus 39.87 37.39
TraesCS3B01G079000.1 Wheat cytosol, nucleus, plastid 35.76 36.33
TraesCS7B01G147600.1 Wheat plastid 25.32 35.09
TraesCS3B01G030800.1 Wheat nucleus, plasma membrane, plastid 31.65 34.13
KXG32016 Sorghum cytosol 33.86 33.23
TraesCS3B01G573000.1 Wheat cytosol 33.23 32.92
TraesCS3B01G079100.1 Wheat cytosol, endoplasmic reticulum, nucleus 33.54 32.62
TraesCS3B01G028800.1 Wheat cytosol, nucleus, peroxisome 34.18 32.43
TraesCS7B01G030300.1 Wheat plastid 32.91 32.3
TraesCS3B01G054300.1 Wheat nucleus, peroxisome, plastid 33.23 31.91
TraesCS3B01G028400.1 Wheat nucleus, peroxisome, plastid 33.86 31.75
TraesCS3B01G054200.1 Wheat nucleus, peroxisome, plastid 32.91 31.33
TraesCS4B01G109100.1 Wheat cytosol, nucleus, plasma membrane 27.22 31.16
TraesCS3B01G055200.1 Wheat nucleus, plasma membrane, plastid 28.8 31.06
TraesCS3B01G030900.1 Wheat cytosol, nucleus, plasma membrane 31.01 30.53
TraesCS3B01G030700.1 Wheat nucleus, peroxisome, plastid 30.7 30.22
TraesCS3B01G054800.1 Wheat nucleus, peroxisome, plastid 31.01 29.97
TraesCS3B01G054900.1 Wheat nucleus, peroxisome, plastid 31.01 29.97
TraesCS3B01G031000.1 Wheat nucleus, plasma membrane, plastid 31.01 29.97
TraesCS5B01G187100.1 Wheat cytosol, nucleus, plastid 25.95 29.71
TraesCS3B01G055000.1 Wheat nucleus, peroxisome, plastid 30.7 29.66
TraesCS3B01G031300.1 Wheat nucleus, plasma membrane, plastid 31.01 29.61
TraesCS3B01G053300.1 Wheat plastid 18.99 29.41
TraesCS3B01G027400.1 Wheat nucleus, peroxisome, plastid 28.8 29.35
TraesCS3B01G054000.1 Wheat cytosol 28.8 29.07
TraesCS3B01G055300.1 Wheat cytosol, nucleus, peroxisome 30.06 29.05
TraesCS3B01G055100.1 Wheat cytosol, nucleus, peroxisome 29.43 28.44
TraesCS3B01G028000.1 Wheat mitochondrion 22.47 26.89
TraesCS3B01G116800.1 Wheat cytosol 25.32 24.24
TraesCS7B01G197600.1 Wheat cytosol 19.3 24.02
TraesCS6B01G375700.1 Wheat plastid 24.05 21.47
TraesCS3B01G018200.1 Wheat plastid 29.11 21.05
TraesCS6B01G375600.1 Wheat plastid 22.47 20.46
TraesCS4B01G105700.1 Wheat cytosol, nucleus, peroxisome 27.53 17.72
TraesCS3B01G018100.1 Wheat nucleus, peroxisome, plasma membrane 29.43 13.68
TraesCS3B01G079200.1 Wheat cytosol, plastid 24.68 13.13
TraesCS1B01G344300.1 Wheat nucleus 27.22 10.09
Protein Annotations
Gene3D:3.30.40.10MapMan:35.1InterPro:7-in-absentia-prot_TRAF-domGO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006511GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009056GO:GO:0009987GO:GO:0019538
InterPro:IPR008974InterPro:IPR013010InterPro:IPR013083PFAM:PF03145PFscan:PS51081PANTHER:PTHR10315
PANTHER:PTHR10315:SF33InterPro:SINA-likeSUPFAM:SSF49599InterPro:TRAF-likeEnsemblPlantsGene:TraesCS7B01G040200EnsemblPlants:TraesCS7B01G040200.1
InterPro:Znf_RING/FYVE/PHDInterPro:Znf_SIAHSEG:seg:::
Description
No Description!
Coordinates
chr7B:-:40286571..40287760
Molecular Weight (calculated)
33038.9 Da
IEP (calculated)
6.974
GRAVY (calculated)
0.058
Length
316 amino acids
Sequence
(BLAST)
001: MEGGEMCGKS VSEEVKPEWE EGEVLMQGEG GGGGDGGAAT AAGEAMAPVQ IDVRMDVALL HCQACLLPLK PPVFKCEAAG HVVCCFCRAG HAALCSRAGT
101: HCGELDAVLG AAKVPCPYKV FGCERYVVYH GAADHQRACQ CAPCSCPEPG CVFVGSRAML LDHFAAGHQR HAVTVRYGRP WNLGFSLSRR WHVLVGEDRS
201: VFLVSLGPLG AATAVSLVCV RPDGAGEAAP QFRCKLSVER PAGDDKDNLV LMTSAVSSSA LSTGAPAPGQ GMFLAVPQEL LSGDTLMLSV RIDLIRPAGG
301: APKSATPQAR TPRRMQ
Best Arabidopsis Sequence Match ( AT5G62800.1 )
(BLAST)
001: MEDSNSHPQN QTSKRKSSHP QKKQRMENET RSAKLLDLDV LDCPVCFEPL TIPTFQCDDG HIVCNFCFAK VSNKCPGPGC DLPIGNKRCF AMERVLESAF
101: VPCQNTEFGC TKSVSYEKVS SHEKECNYSQ CSCPNLECNY TGSYNIIYGH FMRRHLYNST IVSSKWGYST VDVLINIKEK VSVLWESRQK LLFVVQCFKE
201: RHGVYVTVRR IAPPASEFKK FSYRLSYSID GHNVTYESPE VKRLLEVNSQ IPDDSFMFVP NCLLHGEMLE LKLGIKKLKQ TCIIQKLSGL VPGSVLYIVG
301: FLIKPANEVQ QVTIAQETVM EDPPTSLFKN SVPIREDQIQ NAITNSIR
Arabidopsis Description
Protein with RING/U-box and TRAF-like domains [Source:TAIR;Acc:AT5G62800]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.