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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • endoplasmic reticulum 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G079000.1 Wheat cytosol, nucleus, plastid 84.62 88.42
TraesCS3D01G066100.1 Wheat cytosol, nucleus, plastid 83.69 86.9
TraesCS3B01G054300.1 Wheat nucleus, peroxisome, plastid 63.69 62.92
TraesCS3B01G030900.1 Wheat cytosol, nucleus, plasma membrane 61.23 61.99
TraesCS3B01G028800.1 Wheat cytosol, nucleus, peroxisome 63.38 61.86
TraesCS3B01G055200.1 Wheat nucleus, plasma membrane, plastid 55.69 61.77
TraesCS3B01G030800.1 Wheat nucleus, plasma membrane, plastid 55.08 61.09
TraesCS3B01G054900.1 Wheat nucleus, peroxisome, plastid 61.23 60.86
TraesCS3B01G054800.1 Wheat nucleus, peroxisome, plastid 61.23 60.86
TraesCS3B01G055000.1 Wheat nucleus, peroxisome, plastid 60.92 60.55
TraesCS3B01G054200.1 Wheat nucleus, peroxisome, plastid 61.85 60.54
TraesCS3B01G028400.1 Wheat nucleus, peroxisome, plastid 62.46 60.24
TraesCS3B01G055300.1 Wheat cytosol, nucleus, peroxisome 60.31 59.94
TraesCS3B01G055100.1 Wheat cytosol, nucleus, peroxisome 60.0 59.63
TraesCS3B01G030700.1 Wheat nucleus, peroxisome, plastid 57.85 58.57
TraesCS3B01G031000.1 Wheat nucleus, plasma membrane, plastid 58.77 58.41
TraesCS3B01G031300.1 Wheat nucleus, plasma membrane, plastid 56.62 55.59
HORVU1Hr1G023820.1 Barley extracellular 31.38 55.14
TraesCS7B01G030300.1 Wheat plastid 47.69 48.14
TraesCS3B01G027400.1 Wheat nucleus, peroxisome, plastid 44.92 47.1
HORVU4Hr1G069550.1 Barley plastid 26.15 43.59
TraesCS7B01G147600.1 Wheat plastid 28.92 41.23
TraesCS5B01G187100.1 Wheat cytosol, nucleus, plastid 33.85 39.86
Os01t0122701-00 Rice plastid 12.31 39.6
TraesCS4B01G109100.1 Wheat cytosol, nucleus, plasma membrane 33.54 39.49
EES00397 Sorghum plastid 37.23 37.58
TraesCS3B01G053300.1 Wheat plastid 22.46 35.78
HORVU3Hr1G012260.1 Barley cytosol, nucleus 39.38 35.56
TraesCS7B01G351200.1 Wheat cytosol, nucleus, plastid 32.92 34.74
TraesCS7B01G040200.1 Wheat cytosol 32.62 33.54
TraesCS3B01G026900.1 Wheat nucleus 31.38 31.88
TraesCS3B01G054000.1 Wheat cytosol 30.15 31.31
TraesCS3B01G027500.1 Wheat cytosol, endoplasmic reticulum, nucleus 28.62 29.62
TraesCS3B01G028000.1 Wheat mitochondrion 23.38 28.79
TraesCS3B01G018200.1 Wheat plastid 38.15 28.38
TraesCS3B01G027000.1 Wheat cytosol, nucleus, plastid 29.85 27.17
TraesCS3B01G116800.1 Wheat cytosol 27.08 26.67
TraesCS3B01G572900.1 Wheat cytosol 28.31 25.41
TraesCS3B01G573000.1 Wheat cytosol 24.62 25.08
TraesCS7B01G197600.1 Wheat cytosol 19.08 24.41
TraesCS6B01G375600.1 Wheat plastid 24.31 22.77
TraesCS6B01G375700.1 Wheat plastid 23.08 21.19
TraesCS4B01G105700.1 Wheat cytosol, nucleus, peroxisome 29.54 19.55
TraesCS3B01G018100.1 Wheat nucleus, peroxisome, plasma membrane 36.92 17.65
TraesCS3B01G079200.1 Wheat cytosol, plastid 26.77 14.65
TraesCS1B01G344300.1 Wheat nucleus 37.23 14.2
Protein Annotations
Gene3D:3.30.40.10MapMan:35.2InterPro:7-in-absentia-prot_TRAF-domGO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006511GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009056GO:GO:0009987GO:GO:0019538
InterPro:IPR008974InterPro:IPR013010InterPro:IPR013083PFAM:PF03145PFscan:PS51081PANTHER:PTHR10315
PANTHER:PTHR10315:SF46InterPro:SINA-likeSUPFAM:SSF49599InterPro:TRAF-likeEnsemblPlantsGene:TraesCS3B01G079100EnsemblPlants:TraesCS3B01G079100.1
InterPro:Znf_RING/FYVE/PHDInterPro:Znf_SIAHSEG:seg:::
Description
No Description!
Coordinates
chr3B:+:50020838..50021909
Molecular Weight (calculated)
33562.5 Da
IEP (calculated)
7.026
GRAVY (calculated)
0.085
Length
325 amino acids
Sequence
(BLAST)
001: MQGAGAEGGN RGSPSTMEKA DESAKKARLE LPNGHVKQEV GVQHAVGGDD GGAIVPAEAG HGSRVELAVK IDMSVLHCPL CTLPFKPPVL QCNKGGHLAC
101: GGCVALLPGG QCRACEDGGG FFSPCPALDA IVSSTKIVCP NAGCQTYVPY HEAADHRSAC PHAPCHCTEP GCGFVGAPQA LAGHLVDLHS VPVRTVQYGR
201: VSQVPVSGRR QLLVAEEDGR SFLLTVGALG AAAAAVSVVC VRASASTQPR FSCKMWVNLV QPASGGRADM VLVDIQMRSS ATPGAVVAVD EPTFLAVPRM
301: YMVPVDGDAA SMEVPLNIRV DKISR
Best Arabidopsis Sequence Match ( AT1G66650.1 )
(BLAST)
001: MTKLGRRNDG GGKSHRSSTK RQRRTSVSVD DPSPGEEEEK TLVVLTDDSD SEEDDKPLGD VLRTCRKRRV SSPKSVTLPN SNVLECPNCF DPLKKPIFQC
101: NNGHLACFLC CIKLKKRCSF CKLPIGDVRC RAMEKVIKAG LVSCSNAIYG CKQSTTYGNQ LQSHEKVCVF APCSCPIKDC NYIGFYKDLI NHFRATHKVS
201: PGDINSFVFD RPVIFGLDLD SSDKMVIFVE EKQGNLFVVQ GFIGSHGVYA TVSHIAPMVP EVRKFSCSLA RLRPYSTLRL GLEVKNIQKL RSQEEQPQED
301: FLLIPSYMVN GDHMKMEISI GDKNDYTHI
Arabidopsis Description
E3 ubiquitin-protein ligase SINA-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9M0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.