Factsheet for TraesCS2A01G361500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G505500.1	Wheat	cytosol	81.96	81.19
TraesCS3A01G505400.1	Wheat	cytosol	45.57	40.11
TraesCS7A01G138000.1	Wheat	nucleus	35.76	35.76
TraesCS3A01G028900.1	Wheat	cytosol, nucleus, plastid	37.34	33.43
TraesCS3A01G021100.2	Wheat	cytosol, nucleus, plastid	23.1	32.88
TraesCS7A01G451200.1	Wheat	cytosol, nucleus, plastid	31.33	31.23
TraesCS3A01G028800.1	Wheat	cytosol, nucleus, plastid	31.01	30.62
TraesCS3A01G029500.1	Wheat	cytosol, nucleus, peroxisome	28.48	27.27
TraesCS3A01G065700.1	Wheat	cytosol, nucleus, plastid	27.53	26.28
Os01t0121950-00	Rice	cytosol, endoplasmic reticulum, nucleus	29.75	25.61
TraesCS3A01G030000.1	Wheat	nucleus, plasma membrane, plastid	26.58	25.38
Zm00001d008514_P001	Maize	cytosol, nucleus, plastid	26.58	24.93
KXG32022	Sorghum	nucleus	26.27	24.63
EES00395	Sorghum	cytosol, nucleus, plastid	26.58	24.56
TraesCS3A01G031400.1	Wheat	cytosol, nucleus, peroxisome	25.32	24.39
TraesCS5A01G435500.1	Wheat	cytosol, nucleus, plastid	22.78	24.32
TraesCS3A01G065900.1	Wheat	cytosol	15.19	20.96
KXG32016	Sorghum	cytosol	20.57	20.19
TraesCS3A01G065800.1	Wheat	cytosol	12.34	19.9
TraesCS3A01G029400.1	Wheat	cytosol, nucleus, peroxisome	18.99	19.61
TraesCS3A01G029300.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	20.57	18.62
TraesCS6A01G343600.1	Wheat	plastid	18.35	16.71
TraesCS3A01G020900.1	Wheat	cytosol	15.19	16.11
TraesCS4A01G201600.1	Wheat	cytosol, nucleus, peroxisome	20.57	12.75
TraesCS3A01G028000.1	Wheat	plasma membrane	25.0	12.17
TraesCS3A01G028600.1	Wheat	plastid	23.73	10.84
TraesCS3A01G028500.1	Wheat	plastid	21.84	6.69

Protein Annotations

MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006511	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	InterPro:IPR008974	PANTHER:PTHR10315	PANTHER:PTHR10315:SF33
InterPro:SINA-like	SUPFAM:SSF49599	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS2A01G361500	EnsemblPlants:TraesCS2A01G361500.1	SEG:seg

Description

No Description!

Coordinates

chr2A:-:605336239..605337360

Molecular Weight (calculated)

33441.1 Da

IEP (calculated)

6.423

GRAVY (calculated)

-0.131

Length

316 amino acids

Sequence
(BLAST)

001: MAHGSSGDGG GGDGDLAVVS VEAKPQPWRA PALDVPPFLI FEKCRAPELL DCHACHLPLK PPIFSCDDGH LMCSCCRGAH GEDCGRVAAH CRLADAYAGA
101: VKLPCDYVEF GCEAGLVGPG GGEGGCDFSG SRQMLLDHIS TEHSRPVIVV RYGQPGKLSL PLTRRWHVLV GEEDMADRQR NVFLLVLAEQ DKGAAVSMVC
201: VRADEGAPAV PQFSYKLTVE HAGSGARVTF ELPVMTCSSL PGGTPWPDEV TSLYVPKAYL SGDAVPLGIH IDKLVPPPLP PPSDTTPPAP ATAAVFKFTA
301: TDQGNKKRKS SNPRKL

Best Arabidopsis Sequence Match ( AT5G62800.1 )
(BLAST)

001: MEDSNSHPQN QTSKRKSSHP QKKQRMENET RSAKLLDLDV LDCPVCFEPL TIPTFQCDDG HIVCNFCFAK VSNKCPGPGC DLPIGNKRCF AMERVLESAF
101: VPCQNTEFGC TKSVSYEKVS SHEKECNYSQ CSCPNLECNY TGSYNIIYGH FMRRHLYNST IVSSKWGYST VDVLINIKEK VSVLWESRQK LLFVVQCFKE
201: RHGVYVTVRR IAPPASEFKK FSYRLSYSID GHNVTYESPE VKRLLEVNSQ IPDDSFMFVP NCLLHGEMLE LKLGIKKLKQ TCIIQKLSGL VPGSVLYIVG
301: FLIKPANEVQ QVTIAQETVM EDPPTSLFKN SVPIREDQIQ NAITNSIR

Arabidopsis Description

Protein with RING/U-box and TRAF-like domains [Source:TAIR;Acc:AT5G62800]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.