Factsheet for TraesCS3A01G505500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G573000.1	Wheat	cytosol	91.85	91.85
TraesCS2A01G361500.1	Wheat	cytosol	81.19	81.96
TraesCS3A01G505400.1	Wheat	cytosol	42.95	38.16
TraesCS7A01G138000.1	Wheat	nucleus	33.54	33.86
TraesCS3A01G028900.1	Wheat	cytosol, nucleus, plastid	36.05	32.58
TraesCS3A01G021100.2	Wheat	cytosol, nucleus, plastid	20.69	29.73
TraesCS7A01G451200.1	Wheat	cytosol, nucleus, plastid	29.47	29.65
TraesCS3A01G028800.1	Wheat	cytosol, nucleus, plastid	29.47	29.38
TraesCS3A01G029500.1	Wheat	cytosol, nucleus, peroxisome	26.33	25.45
EES00395	Sorghum	cytosol, nucleus, plastid	26.02	24.27
TraesCS3A01G065700.1	Wheat	cytosol, nucleus, plastid	24.76	23.87
Zm00001d008514_P001	Maize	cytosol, nucleus, plastid	25.08	23.74
Os01t0121950-00	Rice	cytosol, endoplasmic reticulum, nucleus	26.96	23.43
TraesCS5A01G435500.1	Wheat	cytosol, nucleus, plastid	21.63	23.31
TraesCS3A01G030000.1	Wheat	nucleus, plasma membrane, plastid	24.14	23.26
TraesCS3A01G031400.1	Wheat	cytosol, nucleus, peroxisome	23.51	22.87
KXG32022	Sorghum	nucleus	23.82	22.55
TraesCS3A01G065900.1	Wheat	cytosol	15.36	21.4
TraesCS3A01G065800.1	Wheat	cytosol	11.91	19.39
KXG32016	Sorghum	cytosol	19.44	19.25
TraesCS3A01G029400.1	Wheat	cytosol, nucleus, peroxisome	17.87	18.63
TraesCS3A01G029300.1	Wheat	nucleus, peroxisome, plasma membrane, plastid	19.12	17.48
TraesCS6A01G343600.1	Wheat	plastid	18.5	17.0
TraesCS3A01G020900.1	Wheat	cytosol	14.42	15.44
TraesCS4A01G201600.1	Wheat	cytosol, nucleus, peroxisome	19.44	12.16
TraesCS3A01G028000.1	Wheat	plasma membrane	23.51	11.56
TraesCS3A01G028600.1	Wheat	plastid	21.94	10.12
TraesCS3A01G028500.1	Wheat	plastid	18.81	5.81

Protein Annotations

MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006511	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	InterPro:IPR008974	PANTHER:PTHR10315	PANTHER:PTHR10315:SF33
InterPro:SINA-like	SUPFAM:SSF49599	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS3A01G505500	EnsemblPlants:TraesCS3A01G505500.1	SEG:seg

Description

No Description!

Coordinates

chr3A:+:727352510..727353664

Molecular Weight (calculated)

33729.5 Da

IEP (calculated)

6.872

GRAVY (calculated)

-0.165

Length

319 amino acids

Sequence
(BLAST)

001: MGHGSSGDGG GGGDGALAVV PEEAKPQPQM QRQTALDVPP FLIFEKCRAP ELLECHACHL PLKPPIFSCD DGHLMCSSCR GAHGEDCGRV AAHCRLADAY
101: AGAVKLPCDY VKFGCEAGLI GPGGAEGGCN FSGSRQMLLD HISTEHSSPI IVVRYGQPGK LSLPLTRRWH VLVGEEDMAD RQRNVFVLVL AERDKGAAVS
201: MVCVRADEGA PAVPQFSYKL TVEHAGSGAR VTFELPVMTC SSLPGGTPWP DEVTSLYVPK AYLSGDAVPL GIHIDKLVPP PLPPPSDTTT PAPATAAVFK
301: FTATDQGNKK RKSSNPRKL

Best Arabidopsis Sequence Match ( AT5G62800.1 )
(BLAST)

001: MEDSNSHPQN QTSKRKSSHP QKKQRMENET RSAKLLDLDV LDCPVCFEPL TIPTFQCDDG HIVCNFCFAK VSNKCPGPGC DLPIGNKRCF AMERVLESAF
101: VPCQNTEFGC TKSVSYEKVS SHEKECNYSQ CSCPNLECNY TGSYNIIYGH FMRRHLYNST IVSSKWGYST VDVLINIKEK VSVLWESRQK LLFVVQCFKE
201: RHGVYVTVRR IAPPASEFKK FSYRLSYSID GHNVTYESPE VKRLLEVNSQ IPDDSFMFVP NCLLHGEMLE LKLGIKKLKQ TCIIQKLSGL VPGSVLYIVG
301: FLIKPANEVQ QVTIAQETVM EDPPTSLFKN SVPIREDQIQ NAITNSIR

Arabidopsis Description

Protein with RING/U-box and TRAF-like domains [Source:TAIR;Acc:AT5G62800]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.