Factsheet for TraesCSU01G207000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

plastid 3
mitochondrion 1
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G222300.1	Wheat	cytosol, peroxisome, plastid	100.0	41.18
TraesCS3B01G055200.1	Wheat	nucleus, plasma membrane, plastid	93.65	40.27
Os01t0122701-00	Rice	plastid	30.16	37.62
TraesCS3B01G054800.1	Wheat	nucleus, peroxisome, plastid	92.86	35.78
TraesCS3B01G054900.1	Wheat	nucleus, peroxisome, plastid	92.86	35.78
TraesCS3B01G055000.1	Wheat	nucleus, peroxisome, plastid	92.86	35.78
TraesCS3B01G055100.1	Wheat	cytosol, nucleus, peroxisome	92.86	35.78
TraesCSU01G043600.1	Wheat	nucleus	83.33	31.34
TraesCSU01G045700.1	Wheat	nucleus, peroxisome, plastid	83.33	31.34
TraesCS3D01G028300.1	Wheat	nucleus, peroxisome, plastid	80.16	30.98
TraesCS3D01G028400.1	Wheat	nucleus, plasma membrane, plastid	74.6	29.01
TraesCSU01G044900.1	Wheat	cytosol, nucleus, peroxisome	68.25	25.9
HORVU3Hr1G005380.1	Barley	cytosol, nucleus, plastid	65.08	24.85
TraesCSU01G046200.1	Wheat	nucleus, plasma membrane, plastid	38.89	16.17
TraesCSU01G178600.1	Wheat	nucleus, plasma membrane, plastid	38.1	15.58
EES00397	Sorghum	plastid	35.71	13.98
TraesCSU01G046100.1	Wheat	cytosol	26.19	10.48
TraesCSU01G050700.1	Wheat	cytosol, nucleus, plastid	26.98	9.52
TraesCSU01G043700.1	Wheat	cytosol	23.02	9.18
TraesCSU01G166800.1	Wheat	plastid	33.33	6.07
TraesCSU01G040300.1	Wheat	cytosol, nucleus, plastid	10.32	5.86
TraesCSU01G177200.1	Wheat	cytosol, nucleus, plastid	10.32	5.86
TraesCSU01G166900.1	Wheat	plasma membrane	31.75	4.21
TraesCSU01G040400.1	Wheat	cytosol	0.79	0.34
TraesCSU01G206900.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCSU01G207000.1	EnsemblPlantsGene:TraesCSU01G207000	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006511	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0019538	InterPro:SINA-like	PANTHER:PTHR10315	PANTHER:PTHR10315:SF46	SEG:seg	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:307488508..307488888

Molecular Weight (calculated)

13252.3 Da

IEP (calculated)

7.930

GRAVY (calculated)

0.397

Length

126 amino acids

Sequence
(BLAST)

001: MRLVLLGDDN CVFLKTVGAL GAGVTAVSVV CARARAARRP RFTCKMWVNL ETPPAAVANC GKEDVVLVDM QMRSSSSPGA VVAAGEPTFL TVPPMYLVPA
101: AGDGASMEVP LHIRIDKLSP WSDALV

Best Arabidopsis Sequence Match ( AT5G18980.2 )
(BLAST)

001: MFLCSDSIFK PRSREATARD CVVPETTLET WKNSDVPLLP YARWFFISST VSRLLYWLQL LSATACVALS SYKLIRHNYG DVHKGDTDKR NRQSALNIFY
101: SLAFAEALLF LVEKVYWEWQ VSVCNLLENV TRECEFGVSG LVSIKRFFYD SYSKCVNGSI FDGLKMDIVS FGMELLNSNS SDEQLIGVRI LRQFSVTERY
201: SEDTLEKIGI NFPVIERLVE MLNWKDLQEE EIRRSAAEIL SKLAGKKQNS LRVAGISGAM ESISSLLENT RSSGEAPDEI GEKKVFHDHN LHYDFWRFNN
301: LGLLILKKLA KDHDNCGKLG NTRGLLPKII DFTHADENLL RDENADIARS RVLTLKRSLQ LVKMLASTTG NTGKCLRREI SEIVFTVSNV RDVLKHGARY
401: PKLQKLGIGI LTNLALEAEA RERIGGTGGV LKELFNIFFK RETRGDEGNE GCVRIAAGEA IAMLVLESKS NCLHVLRLGV MGRLVEALEV PSIRVNAARV
501: LRNMCLYSGD ECFHDLKFVK AAAPTVLKSI TSEDNKLQEV MVGLAAQVFR FMSSKESSYV FMYSGIKRQE LANSLVSILK KNDKPAIKVP RIRRFVIELA
601: IWMMEDDELE DNVALFREMG LEKELEKVLE TTAELENFDV FSGTVGLSRH SRTVHSLAEL ALEILRG

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q93ZV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.