Factsheet for HORVU2Hr1G020530.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 1
cytosol 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G062590.3	Barley	cytosol, extracellular, plastid	89.31	89.31
HORVU7Hr1G049290.1	Barley	cytosol, extracellular, plastid	89.31	89.31
Os01t0122701-00	Rice	plastid	32.06	41.58
TraesCS3D01G055600.1	Wheat	cytosol, nucleus, peroxisome	74.81	30.91
HORVU3Hr1G005450.2	Barley	endoplasmic reticulum, nucleus, peroxisome	54.96	23.08
HORVU3Hr1G005380.1	Barley	cytosol, nucleus, plastid	48.09	19.09
HORVU3Hr1G005290.2	Barley	plastid	49.62	17.38
EES00397	Sorghum	plastid	39.69	16.15
HORVU4Hr1G069550.1	Barley	plastid	22.9	15.38
HORVU3Hr1G005430.1	Barley	plastid	29.01	15.08
HORVU7Hr1G101970.2	Barley	cytosol, endoplasmic reticulum, nucleus	31.3	13.02
HORVU4Hr1G016950.1	Barley	plastid	29.01	12.42
HORVU6Hr1G082920.1	Barley	plastid	31.3	10.71
HORVU3Hr1G005470.1	Barley	plastid	22.9	9.43
HORVU3Hr1G012260.1	Barley	cytosol, nucleus	25.19	9.17
HORVU6Hr1G082930.1	Barley	cytosol, mitochondrion, nucleus, plastid	22.14	8.24
HORVU1Hr1G023820.1	Barley	extracellular	10.69	7.57
HORVU3Hr1G005410.9	Barley	mitochondrion	41.98	7.32
HORVU3Hr1G005400.7	Barley	plasma membrane, plastid	43.51	5.46

Protein Annotations

EnsemblPlants:HORVU2Hr1G020530.1	EnsemblPlantsGene:HORVU2Hr1G020530	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006511	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0019538	InterPro:SINA-like	PANTHER:PTHR10315	PANTHER:PTHR10315:SF46	SEG:seg	UniParc:UPI000B4753B1
UniProt:A0A287HAK6	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:56060321..56060716

Molecular Weight (calculated)

13901.3 Da

IEP (calculated)

10.283

GRAVY (calculated)

0.438

Length

131 amino acids

Sequence
(BLAST)

001: MPVHRVQYGK VVVLQVPATL EVRGLLLGGE DGRTFLIVNG ALGAGTAVSV VCVRAEALVW PRYTLKVWAS RPAPAPNRKG KADTIMAEIE VTSSTAPGAV
101: AVEELAYLAV PPKLLVGVGA FRLMSLRIRI D

Best Arabidopsis Sequence Match ( AT4G28570.1 )
(BLAST)

001: MEDVRRRNRG HPLLRSKKRG EGYNHGFSPS QIQSLAVICQ TFLPPETTSE QQAVNSFHVA SSTQPPFTDE VAEMIVKNGR SEAVKVLRII LMILSFRFGT
101: LLLCGSLCLD KSWPFVLKFS QLPLDKREAI LRNWSRQSGF LLPFRITFFL AKFYTLFYFF SQTDENLKNP ALEAIGYCID GTERSSNKKS EADEKRRPLE
201: KGIIETMHES DVTITQSLTE KGVHVARDDG DNVYRIRCDA VVVGSGSGGG VAAANLAKAG LKVLVLEKGN YFTAHDYSGL EVPSMLELYE KGGLLTTVDG
301: KFMLLAGSAV GGGTAVNWSA SIRTPDHVLQ EWSEGSKIKF FGSQEYQSAM DEVTIRIGVT ERCVKHGFQN QVLRKGCERL GLQVESVPRN SPEDHYCGLC
401: GYGCRAGAKN GTDQTWLVDA VENGAVILTG IKAERFVLVD NTSSSNERKK RCVGVFASSV GGKIGKKFII EARVTVSSAG SLLTPPLMLS SGLKNPNIGR
501: NLKLHPVLMT WGYFPEKDSE FSGKMYEGGI ITSVHHMNDT ESGCKAILEN PLIGPASYAG LSPWVSGPDL KERMIKYGRT AHLFALVRDL GSGEVMMENE
601: VTYRTTKKDR ENLRAGLRQA LRVSVAAGAV EVGTYRSDGQ KMKCEAITKE AMEEFLDEVD AVGGVGTKGE YWTTYFSAHQ MGSCRMGVTA EEGALDENGE
701: SWEAEGLFVC DGSILPSAVG VNPMITIQST AYCISSKIVD SLQNKTKV

Arabidopsis Description

FAO4BLong-chain-alcohol oxidase FAO4B [Source:UniProtKB/Swiss-Prot;Acc:Q94BP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.