Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G171800.1 | Wheat | cytosol | 84.09 | 93.67 |
| TraesCS2B01G198200.1 | Wheat | cytosol | 84.09 | 91.36 |
| GSMUA_AchrUn_... | Banana | cytosol | 81.82 | 91.14 |
| Os07t0608700-02 | Rice | cytosol | 81.82 | 90.0 |
| EER99690 | Sorghum | cytosol | 81.82 | 90.0 |
| GSMUA_Achr5P23160_001 | Banana | cytosol | 79.55 | 88.61 |
| GSMUA_Achr3P20170_001 | Banana | cytosol | 79.55 | 88.61 |
| VIT_08s0007g03130.t01 | Wine grape | cytosol | 79.55 | 87.5 |
| CDY08518 | Canola | cytosol | 78.41 | 87.34 |
| CDY01024 | Canola | cytosol | 78.41 | 87.34 |
| Bra034834.1-P | Field mustard | cytosol | 78.41 | 87.34 |
| Bra034726.1-P | Field mustard | cytosol | 78.41 | 87.34 |
| AT3G11500.2 | Thale cress | cytosol | 78.41 | 87.34 |
| Bra002044.1-P | Field mustard | cytosol | 78.41 | 87.34 |
| CDY23693 | Canola | cytosol | 78.41 | 87.34 |
| CDY39683 | Canola | cytosol | 78.41 | 86.25 |
| CDY65184 | Canola | cytosol | 78.41 | 86.25 |
| Bra032135.1-P | Field mustard | cytosol | 78.41 | 86.25 |
| KRH67942 | Soybean | cytosol | 77.27 | 86.08 |
| KRG96200 | Soybean | nucleus | 77.27 | 86.08 |
| AT2G23930.1 | Thale cress | cytosol | 77.27 | 85.0 |
| PGSC0003DMT400060122 | Potato | cytosol | 76.14 | 83.75 |
| Solyc05g055260.2.1 | Tomato | nucleus | 76.14 | 83.75 |
| KRH28926 | Soybean | nucleus | 75.0 | 83.54 |
| Solyc11g006820.1.1 | Tomato | cytosol, nucleus | 76.14 | 82.72 |
| PGSC0003DMT400061605 | Potato | cytosol | 75.0 | 81.48 |
Protein Annotations
| MapMan:16.4.2.7 | Gene3D:2.30.30.100 | UniProt:A0A287HL01 | GO:GO:0000387 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005681 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016043 | EnsemblPlantsGene:HORVU2Hr1G031890 | EnsemblPlants:HORVU2Hr1G031890.2 | InterPro:LSM_dom_euk/arc | InterPro:LSM_dom_sf |
| PFAM:PF01423 | PANTHER:PTHR10553 | PANTHER:PTHR10553:SF15 | SMART:SM00651 | SUPFAM:SSF50182 | InterPro:Sm_G |
| UniParc:UPI000B4691EC | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:121687557..121690846
Molecular Weight (calculated)
9827.1 Da
IEP (calculated)
9.180
GRAVY (calculated)
-0.174
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MSRSGQPPDL KKYMDKKLQS KCAYQILVKL NANRVVIGTL RGFDQFMNLV VDNTVEVNGD EKTDIGMVVL RGNSVVMIEA LEPIARSQ
1: MSRSGQPPDL KKYMDKKLQI KLNANRMVVG TLRGFDQFMN LVVDNTVEVN GDDKTDIGMV VIRGNSIVTV EALEPVGRS
Arabidopsis Description
Putative small nuclear ribonucleoprotein polypeptide G [Source:UniProtKB/TrEMBL;Acc:Q9CAX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.