Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 3
- mitochondrion 2
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034834.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY01024 | Canola | cytosol | 100.0 | 100.0 |
| CDY08518 | Canola | cytosol | 100.0 | 100.0 |
| CDY23693 | Canola | cytosol | 100.0 | 100.0 |
| Bra002044.1-P | Field mustard | cytosol | 98.73 | 98.73 |
| Bra034726.1-P | Field mustard | cytosol | 98.73 | 98.73 |
| AT2G23930.1 | Thale cress | cytosol | 97.47 | 96.25 |
| VIT_08s0007g03130.t01 | Wine grape | cytosol | 93.67 | 92.5 |
| KRH67942 | Soybean | cytosol | 92.41 | 92.41 |
| KRG96200 | Soybean | nucleus | 92.41 | 92.41 |
| KRH28926 | Soybean | nucleus | 89.87 | 89.87 |
| Zm00001d029483_P001 | Maize | cytosol | 89.87 | 88.75 |
| GSMUA_AchrUn_... | Banana | cytosol | 88.61 | 88.61 |
| EER94701 | Sorghum | cytosol | 89.87 | 87.65 |
| Zm00001d047271_P002 | Maize | cytosol | 88.61 | 87.5 |
| Os03t0410900-01 | Rice | nucleus | 88.61 | 87.5 |
| Solyc05g055260.2.1 | Tomato | nucleus | 87.34 | 86.25 |
| PGSC0003DMT400060122 | Potato | cytosol | 87.34 | 86.25 |
| GSMUA_Achr5P23160_001 | Banana | cytosol | 86.08 | 86.08 |
| GSMUA_Achr3P20170_001 | Banana | cytosol | 86.08 | 86.08 |
| Os07t0608700-02 | Rice | cytosol | 86.08 | 85.0 |
| Solyc11g006820.1.1 | Tomato | cytosol, nucleus | 86.08 | 83.95 |
| EER99690 | Sorghum | cytosol | 84.81 | 83.75 |
| PGSC0003DMT400061605 | Potato | cytosol | 84.81 | 82.72 |
| TraesCS2A01G171800.1 | Wheat | cytosol | 81.01 | 81.01 |
| TraesCS2B01G198200.1 | Wheat | cytosol | 81.01 | 79.01 |
| HORVU2Hr1G031890.2 | Barley | cytosol | 87.34 | 78.41 |
| Zm00001d037942_P001 | Maize | cytosol, nucleus, plastid | 51.9 | 35.65 |
| Zm00001d052555_P001 | Maize | cytosol | 51.9 | 35.65 |
| AT2G03870.2 | Thale cress | cytosol | 35.44 | 28.28 |
| Zm00001d028673_P001 | Maize | extracellular | 50.63 | 22.86 |
Protein Annotations
| MapMan:16.4.2.7 | Gene3D:2.30.30.100 | EntrezGene:820323 | ProteinID:AAG51452.1 | ProteinID:AEE75055.1 | ProteinID:ANM65391.1 |
| ArrayExpress:AT3G11500 | EnsemblPlantsGene:AT3G11500 | RefSeq:AT3G11500 | TAIR:AT3G11500 | RefSeq:AT3G11500-TAIR-G | EnsemblPlants:AT3G11500.2 |
| EMBL:AY062818 | EMBL:BT001203 | GO:GO:0000387 | GO:GO:0000398 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005681 | GO:GO:0005682 | GO:GO:0005685 | GO:GO:0005686 | GO:GO:0005687 | GO:GO:0005689 |
| GO:GO:0005730 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0019013 | GO:GO:0030529 | GO:GO:0034719 | GO:GO:0043186 | GO:GO:0071004 |
| GO:GO:0071011 | GO:GO:0071013 | GO:GO:0097526 | InterPro:LSM_dom_euk/arc | InterPro:LSM_dom_sf | RefSeq:NP_001319523.1 |
| RefSeq:NP_187757.1 | PFAM:PF01423 | PIRSF:PIRSF037188 | PANTHER:PTHR10553 | PANTHER:PTHR10553:SF15 | UniProt:Q9CAX7 |
| SMART:SM00651 | SUPFAM:SSF50182 | InterPro:Sm_G | UniParc:UPI00000AC428 | : | : |
Description
Putative small nuclear ribonucleoprotein polypeptide G [Source:UniProtKB/TrEMBL;Acc:Q9CAX7]
Coordinates
chr3:-:3621333..3622637
Molecular Weight (calculated)
8751.7 Da
IEP (calculated)
9.134
GRAVY (calculated)
-0.273
Length
79 amino acids
Sequence
(BLAST)
(BLAST)
1: MSRSGQPPDL KKYMDKKLQI KLNANRMVVG TLRGFDQFMN LVVDNTVEVN GDDKTDIGMV VIRGNSIVTV EALEPVGRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.