Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G198200.1 | Wheat | cytosol | 100.0 | 97.53 |
| GSMUA_AchrUn_... | Banana | cytosol | 84.81 | 84.81 |
| HORVU2Hr1G031890.2 | Barley | cytosol | 93.67 | 84.09 |
| Os07t0608700-02 | Rice | cytosol | 84.81 | 83.75 |
| EER99690 | Sorghum | cytosol | 84.81 | 83.75 |
| GSMUA_Achr5P23160_001 | Banana | cytosol | 82.28 | 82.28 |
| GSMUA_Achr3P20170_001 | Banana | cytosol | 82.28 | 82.28 |
| VIT_08s0007g03130.t01 | Wine grape | cytosol | 82.28 | 81.25 |
| CDY08518 | Canola | cytosol | 81.01 | 81.01 |
| CDY01024 | Canola | cytosol | 81.01 | 81.01 |
| Bra034834.1-P | Field mustard | cytosol | 81.01 | 81.01 |
| Bra034726.1-P | Field mustard | cytosol | 81.01 | 81.01 |
| AT3G11500.2 | Thale cress | cytosol | 81.01 | 81.01 |
| Bra002044.1-P | Field mustard | cytosol | 81.01 | 81.01 |
| CDY23693 | Canola | cytosol | 81.01 | 81.01 |
| CDY39683 | Canola | cytosol | 81.01 | 80.0 |
| CDY65184 | Canola | cytosol | 81.01 | 80.0 |
| Bra032135.1-P | Field mustard | cytosol | 81.01 | 80.0 |
| KRH67942 | Soybean | cytosol | 79.75 | 79.75 |
| KRG96200 | Soybean | nucleus | 79.75 | 79.75 |
| PGSC0003DMT400060122 | Potato | cytosol | 79.75 | 78.75 |
| Solyc05g055260.2.1 | Tomato | nucleus | 79.75 | 78.75 |
| AT2G23930.1 | Thale cress | cytosol | 79.75 | 78.75 |
| Solyc11g006820.1.1 | Tomato | cytosol, nucleus | 79.75 | 77.78 |
| KRH28926 | Soybean | nucleus | 77.22 | 77.22 |
| PGSC0003DMT400061605 | Potato | cytosol | 78.48 | 76.54 |
| TraesCS2A01G528800.1 | Wheat | cytosol, nucleus, plastid | 31.65 | 25.0 |
| TraesCS7A01G368900.1 | Wheat | cytosol | 31.65 | 24.04 |
Protein Annotations
| MapMan:16.4.2.7 | Gene3D:2.30.30.100 | GO:GO:0000387 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005681 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016043 | InterPro:LSM_dom_euk/arc | InterPro:LSM_dom_sf | PFAM:PF01423 | PANTHER:PTHR10553 | PANTHER:PTHR10553:SF15 |
| SMART:SM00651 | SUPFAM:SSF50182 | InterPro:Sm_G | EnsemblPlantsGene:TraesCS2A01G171800 | EnsemblPlants:TraesCS2A01G171800.1 | TIGR:cd01719 |
Description
No Description!
Coordinates
chr2A:+:127202262..127205248
Molecular Weight (calculated)
8818.6 Da
IEP (calculated)
5.787
GRAVY (calculated)
-0.234
Length
79 amino acids
Sequence
(BLAST)
(BLAST)
1: MSRSGQPPDL KNYSDRHLFK LNANRVVIGT LRGFDQFMNL VVDNTVEVNG DEKTDIGMVV LRGNSVVMIE ALEPIARSQ
1: MSRSGQPPDL KKYMDKKLQI KLNANRMVVG TLRGFDQFMN LVVDNTVEVN GDDKTDIGMV VIRGNSIVTV EALEPVGRS
Arabidopsis Description
Putative small nuclear ribonucleoprotein polypeptide G [Source:UniProtKB/TrEMBL;Acc:Q9CAX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.