Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 3
- mitochondrion 2
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G11500.2 | Thale cress | cytosol | 100.0 | 100.0 |
| CDY01024 | Canola | cytosol | 100.0 | 100.0 |
| CDY08518 | Canola | cytosol | 100.0 | 100.0 |
| CDY39683 | Canola | cytosol | 100.0 | 98.75 |
| CDY65184 | Canola | cytosol | 100.0 | 98.75 |
| VIT_08s0007g03130.t01 | Wine grape | cytosol | 93.67 | 92.5 |
| KRH67942 | Soybean | cytosol | 92.41 | 92.41 |
| KRG96200 | Soybean | nucleus | 92.41 | 92.41 |
| KRH28926 | Soybean | nucleus | 89.87 | 89.87 |
| Zm00001d029483_P001 | Maize | cytosol | 89.87 | 88.75 |
| GSMUA_AchrUn_... | Banana | cytosol | 88.61 | 88.61 |
| EER94701 | Sorghum | cytosol | 89.87 | 87.65 |
| Os03t0410900-01 | Rice | nucleus | 88.61 | 87.5 |
| Zm00001d047271_P002 | Maize | cytosol | 88.61 | 87.5 |
| Solyc05g055260.2.1 | Tomato | nucleus | 87.34 | 86.25 |
| PGSC0003DMT400060122 | Potato | cytosol | 87.34 | 86.25 |
| GSMUA_Achr3P20170_001 | Banana | cytosol | 86.08 | 86.08 |
| GSMUA_Achr5P23160_001 | Banana | cytosol | 86.08 | 86.08 |
| Os07t0608700-02 | Rice | cytosol | 86.08 | 85.0 |
| Solyc11g006820.1.1 | Tomato | cytosol, nucleus | 86.08 | 83.95 |
| EER99690 | Sorghum | cytosol | 84.81 | 83.75 |
| PGSC0003DMT400061605 | Potato | cytosol | 84.81 | 82.72 |
| TraesCS2A01G171800.1 | Wheat | cytosol | 81.01 | 81.01 |
| TraesCS2B01G198200.1 | Wheat | cytosol | 81.01 | 79.01 |
| HORVU2Hr1G031890.2 | Barley | cytosol | 87.34 | 78.41 |
| Zm00001d037942_P001 | Maize | cytosol, nucleus, plastid | 51.9 | 35.65 |
| Zm00001d052555_P001 | Maize | cytosol | 51.9 | 35.65 |
| CDY45725 | Canola | cytosol | 35.44 | 23.33 |
| Zm00001d028673_P001 | Maize | extracellular | 50.63 | 22.86 |
| CDY49697 | Canola | mitochondrion | 35.44 | 17.18 |
| CDX83524 | Canola | golgi | 34.18 | 10.55 |
| CDY48065 | Canola | golgi | 34.18 | 8.06 |
Protein Annotations
| MapMan:16.4.2.7 | Gene3D:2.30.30.100 | GO:A0A078GGF0 | UniProt:A0A078GGF0 | ProteinID:CDY08518.1 | EnsemblPlants:CDY23693 |
| ProteinID:CDY23693 | ProteinID:CDY23693.1 | GO:GO:0000387 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005681 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0030529 | EnsemblPlantsGene:GSBRNA2T00023979001 | InterPro:LSM_dom_euk/arc | InterPro:LSM_dom_sf | PFAM:PF01423 |
| PIRSF:PIRSF037188 | PANTHER:PTHR10553 | PANTHER:PTHR10553:SF15 | SMART:SM00651 | SUPFAM:SSF50182 | InterPro:Sm_G |
| UniParc:UPI00000AC428 | : | : | : | : | : |
Description
BnaC01g24280DBnaA05g27540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGF0]
Coordinates
chrLK032147:+:143015..144231
Molecular Weight (calculated)
8751.7 Da
IEP (calculated)
9.134
GRAVY (calculated)
-0.273
Length
79 amino acids
Sequence
(BLAST)
(BLAST)
1: MSRSGQPPDL KKYMDKKLQI KLNANRMVVG TLRGFDQFMN LVVDNTVEVN GDDKTDIGMV VIRGNSIVTV EALEPVGRS
1: MSRSGQPPDL KKYMDKKLQI KLNANRMVVG TLRGFDQFMN LVVDNTVEVN GDDKTDIGMV VIRGNSIVTV EALEPVGRS
Arabidopsis Description
Putative small nuclear ribonucleoprotein polypeptide G [Source:UniProtKB/TrEMBL;Acc:Q9CAX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.