Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67942 | Soybean | cytosol | 95.0 | 96.2 |
| KRG96200 | Soybean | nucleus | 95.0 | 96.2 |
| AT3G11500.2 | Thale cress | cytosol | 92.5 | 93.67 |
| KRH28926 | Soybean | nucleus | 92.5 | 93.67 |
| CDY23693 | Canola | cytosol | 92.5 | 93.67 |
| CDY08518 | Canola | cytosol | 92.5 | 93.67 |
| Bra034834.1-P | Field mustard | cytosol | 92.5 | 93.67 |
| CDY01024 | Canola | cytosol | 92.5 | 93.67 |
| CDY39683 | Canola | cytosol | 92.5 | 92.5 |
| CDY65184 | Canola | cytosol | 92.5 | 92.5 |
| AT2G23930.1 | Thale cress | cytosol | 92.5 | 92.5 |
| Bra032135.1-P | Field mustard | cytosol | 92.5 | 92.5 |
| Bra034726.1-P | Field mustard | cytosol | 91.25 | 92.41 |
| Bra002044.1-P | Field mustard | cytosol | 91.25 | 92.41 |
| GSMUA_AchrUn_... | Banana | cytosol | 91.25 | 92.41 |
| Os07t0608700-02 | Rice | cytosol | 90.0 | 90.0 |
| Zm00001d029483_P001 | Maize | cytosol | 90.0 | 90.0 |
| GSMUA_Achr5P23160_001 | Banana | cytosol | 88.75 | 89.87 |
| GSMUA_Achr3P20170_001 | Banana | cytosol | 88.75 | 89.87 |
| EER94701 | Sorghum | cytosol | 90.0 | 88.89 |
| Os03t0410900-01 | Rice | nucleus | 88.75 | 88.75 |
| Zm00001d047271_P002 | Maize | cytosol | 88.75 | 88.75 |
| Solyc05g055260.2.1 | Tomato | nucleus | 88.75 | 88.75 |
| PGSC0003DMT400060122 | Potato | cytosol | 88.75 | 88.75 |
| EER99690 | Sorghum | cytosol | 88.75 | 88.75 |
| Solyc11g006820.1.1 | Tomato | cytosol, nucleus | 87.5 | 86.42 |
| PGSC0003DMT400061605 | Potato | cytosol | 86.25 | 85.19 |
| TraesCS2A01G171800.1 | Wheat | cytosol | 81.25 | 82.28 |
| TraesCS2B01G198200.1 | Wheat | cytosol | 81.25 | 80.25 |
| HORVU2Hr1G031890.2 | Barley | cytosol | 87.5 | 79.55 |
| Zm00001d037942_P001 | Maize | cytosol, nucleus, plastid | 55.0 | 38.26 |
| Zm00001d052555_P001 | Maize | cytosol | 55.0 | 38.26 |
| VIT_13s0064g01230.t01 | Wine grape | cytosol | 35.0 | 26.17 |
| Zm00001d028673_P001 | Maize | extracellular | 53.75 | 24.57 |
Protein Annotations
| EntrezGene:100247783 | wikigene:100247783 | MapMan:16.4.2.7 | Gene3D:2.30.30.100 | EMBL:AM449690 | ProteinID:CAN67622 |
| ProteinID:CAN67622.1 | ProteinID:CBI30313 | ProteinID:CBI30313.3 | UniProt:D7TJ87 | EMBL:FN595991 | GO:GO:0000387 |
| GO:GO:0000398 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005681 | GO:GO:0005682 | GO:GO:0005685 |
| GO:GO:0005686 | GO:GO:0005687 | GO:GO:0005689 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030529 | GO:GO:0034719 | GO:GO:0043186 |
| GO:GO:0071004 | GO:GO:0071011 | GO:GO:0071013 | GO:GO:0097526 | EntrezGene:LOC100247783 | wikigene:LOC100247783 |
| InterPro:LSM_dom_euk/arc | InterPro:LSM_dom_sf | PFAM:PF01423 | PIRSF:PIRSF037188 | PANTHER:PTHR10553 | PANTHER:PTHR10553:SF15 |
| SMART:SM00651 | SUPFAM:SSF50182 | InterPro:Sm_G | TIGR:TC62321 | UniParc:UPI00015C9EB9 | ArrayExpress:VIT_08s0007g03130 |
| EnsemblPlantsGene:VIT_08s0007g03130 | EnsemblPlants:VIT_08s0007g03130.t01 | unigene:Vvi.2512 | RefSeq:XP_002282193 | RefSeq:XP_002282193.1 | : |
Description
No Description!
Coordinates
chr8:+:17155224..17158570
Molecular Weight (calculated)
8953.0 Da
IEP (calculated)
9.889
GRAVY (calculated)
-0.289
Length
80 amino acids
Sequence
(BLAST)
(BLAST)
1: MSRSGQPPDL KKYMDKKLQI KLNANRMVVG TLRGFDQFMN LVVDNTVEVN GNEKTDIGMV VIRGNSVVTV EALEPVSRMQ
1: MSRSGQPPDL KKYMDKKLQI KLNANRMVTG TLRGFDQFMN LVVDNTVEVN GNDKTDIGMV VIRGNSIVTV EALEPVGRSS
Arabidopsis Description
SNRNP-GProbable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:O82221]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.