Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G171800.1 | Wheat | cytosol | 97.53 | 100.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 82.72 | 84.81 |
| HORVU2Hr1G031890.2 | Barley | cytosol | 91.36 | 84.09 |
| Os07t0608700-02 | Rice | cytosol | 82.72 | 83.75 |
| EER99690 | Sorghum | cytosol | 82.72 | 83.75 |
| GSMUA_Achr5P23160_001 | Banana | cytosol | 80.25 | 82.28 |
| GSMUA_Achr3P20170_001 | Banana | cytosol | 80.25 | 82.28 |
| VIT_08s0007g03130.t01 | Wine grape | cytosol | 80.25 | 81.25 |
| CDY08518 | Canola | cytosol | 79.01 | 81.01 |
| CDY01024 | Canola | cytosol | 79.01 | 81.01 |
| Bra034834.1-P | Field mustard | cytosol | 79.01 | 81.01 |
| Bra034726.1-P | Field mustard | cytosol | 79.01 | 81.01 |
| AT3G11500.2 | Thale cress | cytosol | 79.01 | 81.01 |
| Bra002044.1-P | Field mustard | cytosol | 79.01 | 81.01 |
| CDY23693 | Canola | cytosol | 79.01 | 81.01 |
| CDY39683 | Canola | cytosol | 79.01 | 80.0 |
| CDY65184 | Canola | cytosol | 79.01 | 80.0 |
| Bra032135.1-P | Field mustard | cytosol | 79.01 | 80.0 |
| KRH67942 | Soybean | cytosol | 77.78 | 79.75 |
| KRG96200 | Soybean | nucleus | 77.78 | 79.75 |
| PGSC0003DMT400060122 | Potato | cytosol | 77.78 | 78.75 |
| Solyc05g055260.2.1 | Tomato | nucleus | 77.78 | 78.75 |
| AT2G23930.1 | Thale cress | cytosol | 77.78 | 78.75 |
| Solyc11g006820.1.1 | Tomato | cytosol, nucleus | 77.78 | 77.78 |
| KRH28926 | Soybean | nucleus | 75.31 | 77.22 |
| PGSC0003DMT400061605 | Potato | cytosol | 76.54 | 76.54 |
| TraesCS2B01G559200.1 | Wheat | cytosol, nucleus, plastid | 30.86 | 25.0 |
| TraesCS7B01G259600.1 | Wheat | cytosol | 28.4 | 22.12 |
Protein Annotations
| MapMan:16.4.2.7 | Gene3D:2.30.30.100 | GO:GO:0000387 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005681 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016043 | InterPro:LSM_dom_euk/arc | InterPro:LSM_dom_sf | PFAM:PF01423 | PANTHER:PTHR10553 | PANTHER:PTHR10553:SF15 |
| SMART:SM00651 | SUPFAM:SSF50182 | InterPro:Sm_G | EnsemblPlantsGene:TraesCS2B01G198200 | EnsemblPlants:TraesCS2B01G198200.1 | TIGR:cd01719 |
Description
No Description!
Coordinates
chr2B:+:175634053..175636972
Molecular Weight (calculated)
9122.0 Da
IEP (calculated)
7.545
GRAVY (calculated)
-0.249
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MSRSGQPPDL KNYSDRHLRF FKLNANRVVI GTLRGFDQFM NLVVDNTVEV NGDEKTDIGM VVLRGNSVVM IEALEPIARS Q
1: MSRSGQPPDL KKYMDKKLQI KLNANRMVVG TLRGFDQFMN LVVDNTVEVN GDDKTDIGMV VIRGNSIVTV EALEPVGRS
Arabidopsis Description
Putative small nuclear ribonucleoprotein polypeptide G [Source:UniProtKB/TrEMBL;Acc:Q9CAX7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.