Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96200 | Soybean | nucleus | 100.0 | 100.0 |
| KRH28926 | Soybean | nucleus | 96.2 | 96.2 |
| VIT_08s0007g03130.t01 | Wine grape | cytosol | 96.2 | 95.0 |
| GSMUA_AchrUn_... | Banana | cytosol | 94.94 | 94.94 |
| AT3G11500.2 | Thale cress | cytosol | 92.41 | 92.41 |
| GSMUA_Achr5P23160_001 | Banana | cytosol | 92.41 | 92.41 |
| GSMUA_Achr3P20170_001 | Banana | cytosol | 92.41 | 92.41 |
| CDY23693 | Canola | cytosol | 92.41 | 92.41 |
| CDY08518 | Canola | cytosol | 92.41 | 92.41 |
| CDY01024 | Canola | cytosol | 92.41 | 92.41 |
| Bra034834.1-P | Field mustard | cytosol | 92.41 | 92.41 |
| CDY39683 | Canola | cytosol | 92.41 | 91.25 |
| CDY65184 | Canola | cytosol | 92.41 | 91.25 |
| Bra032135.1-P | Field mustard | cytosol | 92.41 | 91.25 |
| AT2G23930.1 | Thale cress | cytosol | 92.41 | 91.25 |
| Bra034726.1-P | Field mustard | cytosol | 91.14 | 91.14 |
| Bra002044.1-P | Field mustard | cytosol | 91.14 | 91.14 |
| Os07t0608700-02 | Rice | cytosol | 91.14 | 90.0 |
| EER99690 | Sorghum | cytosol | 89.87 | 88.75 |
| Solyc05g055260.2.1 | Tomato | nucleus | 89.87 | 88.75 |
| PGSC0003DMT400060122 | Potato | cytosol | 89.87 | 88.75 |
| Zm00001d029483_P001 | Maize | cytosol | 88.61 | 87.5 |
| Solyc11g006820.1.1 | Tomato | cytosol, nucleus | 88.61 | 86.42 |
| EER94701 | Sorghum | cytosol | 88.61 | 86.42 |
| Os03t0410900-01 | Rice | nucleus | 87.34 | 86.25 |
| Zm00001d047271_P002 | Maize | cytosol | 87.34 | 86.25 |
| PGSC0003DMT400061605 | Potato | cytosol | 87.34 | 85.19 |
| TraesCS2A01G171800.1 | Wheat | cytosol | 79.75 | 79.75 |
| TraesCS2B01G198200.1 | Wheat | cytosol | 79.75 | 77.78 |
| HORVU2Hr1G031890.2 | Barley | cytosol | 86.08 | 77.27 |
| Zm00001d037942_P001 | Maize | cytosol, nucleus, plastid | 51.9 | 35.65 |
| Zm00001d052555_P001 | Maize | cytosol | 51.9 | 35.65 |
| KRH27506 | Soybean | cytosol | 35.44 | 28.87 |
| KRH58808 | Soybean | cytosol, extracellular, nucleus | 35.44 | 28.28 |
| KRH42700 | Soybean | cytosol, extracellular, nucleus | 35.44 | 28.28 |
| Zm00001d028673_P001 | Maize | extracellular | 50.63 | 22.86 |
Protein Annotations
| EntrezGene:100305530 | EntrezGene:100799718 | MapMan:16.4.2.7 | Gene3D:2.30.30.100 | EMBL:ACUP02002091 | EMBL:ACUP02012147 |
| EMBL:BT089172 | UniProt:C6SVH9 | EnsemblPlantsGene:GLYMA_03G197100 | GO:GO:0000387 | GO:GO:0000398 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005681 | GO:GO:0005682 | GO:GO:0005685 | GO:GO:0005686 | GO:GO:0005687 |
| GO:GO:0005689 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0030529 | GO:GO:0034719 | GO:GO:0043186 | GO:GO:0071004 | GO:GO:0071011 |
| GO:GO:0071013 | GO:GO:0097526 | ProteinID:KRG96200.1 | EnsemblPlants:KRH67942 | ProteinID:KRH67942 | ProteinID:KRH67942.1 |
| InterPro:LSM_dom_euk/arc | InterPro:LSM_dom_sf | PFAM:PF01423 | PIRSF:PIRSF037188 | PANTHER:PTHR10553 | PANTHER:PTHR10553:SF15 |
| SMART:SM00651 | SUPFAM:SSF50182 | InterPro:Sm_G | UniParc:UPI00019AAA07 | : | : |
Description
hypothetical protein
Coordinates
chr3:-:40658991..40660387
Molecular Weight (calculated)
8834.8 Da
IEP (calculated)
9.889
GRAVY (calculated)
-0.351
Length
79 amino acids
Sequence
(BLAST)
(BLAST)
1: MSRSGQPPDL KKYMDKKLQI KLNANRMVVG TLRGFDQFMN LVVDNTVEVN GNEKNDIGMV VIRGNSVVTV EALEPVNRT
1: MSRSGQPPDL KKYMDKKLQI KLNANRMVTG TLRGFDQFMN LVVDNTVEVN GNDKTDIGMV VIRGNSIVTV EALEPVGRSS
Arabidopsis Description
SNRNP-GProbable small nuclear ribonucleoprotein G [Source:UniProtKB/Swiss-Prot;Acc:O82221]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.