Factsheet for HORVU7Hr1G095390.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G308300.4	Wheat	cytosol, mitochondrion, nucleus	98.42	65.01
TraesCS7D01G401900.4	Wheat	cytosol, mitochondrion, nucleus	98.42	64.84
TraesCS7A01G408600.1	Wheat	cytosol, nucleus, plastid	98.42	64.84
HORVU7Hr1G095400.5	Barley	cytosol, mitochondrion, nucleus	100.0	60.96
VIT_02s0087g00790.t01	Wine grape	nucleus	71.54	59.34
Os06t0709100-01	Rice	nucleus	87.75	59.2
KRH76466	Soybean	nucleus	71.54	55.86
KXG20829	Sorghum	nucleus	83.79	55.64
KRH28992	Soybean	nucleus	69.96	54.97
Zm00001d014742_P001	Maize	nucleus	79.84	50.12
AT5G45360.1	Thale cress	nucleus	57.71	46.2
CDY64948	Canola	nucleus	57.31	46.18
CDY39424	Canola	nucleus	57.31	46.18
Bra025080.1-P	Field mustard	nucleus	57.31	46.03
Bra027603.1-P	Field mustard	nucleus	56.52	45.98
CDY13058	Canola	nucleus	56.13	45.66
CDY23126	Canola	nucleus	56.13	45.08
PGSC0003DMT400047541	Potato	nucleus	66.4	43.3
PGSC0003DMT400004963	Potato	nucleus	68.77	41.83
Solyc08g075380.2.1	Tomato	nucleus	68.38	41.59
GSMUA_Achr1P10670_001	Banana	cytosol	71.54	35.77
CDY35006	Canola	nucleus	13.44	29.31

Protein Annotations

EnsemblPlants:HORVU7Hr1G095390.2	EnsemblPlantsGene:HORVU7Hr1G095390	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR22990	PANTHER:PTHR22990:SF27	PFAM:PF12937
PFscan:PS50181	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI00029578D6	UniProt:M0USY1	MapMan:19.2.2.8.1.4.6

Description

No Description!

Coordinates

chrchr7H:+:582030165..582033074

Molecular Weight (calculated)

28888.0 Da

IEP (calculated)

4.591

GRAVY (calculated)

-0.374

Length

253 amino acids

Sequence
(BLAST)

001: MFTNVPPELF LQIFKFLSSE DLISCALVCR FMNAAASDET LWRRLYCMRW GLSSNATSNA KLRECAWKSL YIQQDREDMV EFVRYTPTEF KEYYIQMQAA
101: KRSQAPLPSE VNDDKIVLDK TVADQVSSWK SRRGLTDDAV KGHSCSGSTC FYKQIGDAYI CEKTGRVHVC DDACREFVLD QTSGLLVCTI SGHCFERFLC
201: PDDEWDTCDT DQQQGGVTDE AEPFMGSGRF ARAYQLGYSC ADEKELEYAL RFC

Best Arabidopsis Sequence Match ( AT5G45360.1 )
(BLAST)

001: MSVSDEEDEC FARFLESEVS SVEDKEETKE PEAKRQRIEK GETKALEKDE DQKENGNKDK TDAKRIESGV FTNVPTELFR HILKFLSSED LVSCSLVCKF
101: LNFAAADESL WRRLYCIRWG LTLPSRKLRE SAWKKLYIDR DEQDMIELVR TCPSDFKEYY VHMQAAKRSQ APLPSQMVDD RIILDNTVLE QVSLWKKSKG
201: LTDKAVTGHI CLGTKCSYHQ IDDVFICKET GNVHVCDDNC KEVILSPEGD LMVCTISGVC SDTLLVQTEP DADGCYEEEA ELEAEVFTDK SRLARAFELG
301: YNCDDEQELE RTLRFC

Arabidopsis Description

SKIP31F-box protein SKIP31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHK0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.