Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G095390.2 | Barley | cytosol | 59.2 | 87.75 |
| TraesCS7A01G408600.1 | Wheat | cytosol, nucleus, plastid | 77.33 | 75.52 |
| TraesCS7D01G401900.4 | Wheat | cytosol, mitochondrion, nucleus | 77.07 | 75.26 |
| TraesCS7B01G308300.4 | Wheat | cytosol, mitochondrion, nucleus | 76.8 | 75.2 |
| KXG20829 | Sorghum | nucleus | 75.2 | 74.02 |
| HORVU7Hr1G095400.5 | Barley | cytosol, mitochondrion, nucleus | 76.8 | 69.4 |
| Zm00001d014742_P001 | Maize | nucleus | 72.53 | 67.49 |
| VIT_02s0087g00790.t01 | Wine grape | nucleus | 52.53 | 64.59 |
| KRH28992 | Soybean | nucleus | 52.8 | 61.49 |
| KRH76466 | Soybean | nucleus | 52.8 | 61.11 |
| Bra027603.1-P | Field mustard | nucleus | 42.67 | 51.45 |
| CDY64948 | Canola | nucleus | 42.93 | 51.27 |
| CDY13058 | Canola | nucleus | 42.4 | 51.13 |
| CDY23126 | Canola | nucleus | 42.67 | 50.79 |
| CDY39424 | Canola | nucleus | 42.4 | 50.64 |
| PGSC0003DMT400047541 | Potato | nucleus | 52.27 | 50.52 |
| Bra025080.1-P | Field mustard | nucleus | 42.4 | 50.48 |
| AT5G45360.1 | Thale cress | nucleus | 42.13 | 50.0 |
| PGSC0003DMT400004963 | Potato | nucleus | 52.0 | 46.88 |
| Solyc08g075380.2.1 | Tomato | nucleus | 52.0 | 46.88 |
| CDY35006 | Canola | nucleus | 13.6 | 43.97 |
| GSMUA_Achr1P10670_001 | Banana | cytosol | 54.93 | 40.71 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.6 | EntrezGene:4342027 | EMBL:AK059732 | ProteinID:BAD53635.1 | ProteinID:BAS99442.1 |
| ProteinID:EAZ38244.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0019538 | InterPro:IPR001810 | EnsemblPlantsGene:Os06g0709100 | EnsemblPlants:Os06t0709100-01 | PFAM:PF12937 |
| PFscan:PS50181 | PANTHER:PTHR22990 | PANTHER:PTHR22990:SF27 | UniProt:Q5Z9H2 | SMART:SM00256 | SUPFAM:SSF81383 |
| UniParc:UPI0000446DEE | RefSeq:XP_015643512.1 | SEG:seg | : | : | : |
Description
F-box protein 327Cyclin-like F-box domain containing protein. (Os06t0709100-01);Cyclin-like F-box domain containing protein. (Os06t0709100-02)
Coordinates
chr6:+:29996311..29999057
Molecular Weight (calculated)
41876.1 Da
IEP (calculated)
4.110
GRAVY (calculated)
-0.728
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGQEDAAG LDDDLVLEDE LRGREEGEDG GGGGGEEEEE DDVDGLASFL ESEILSGSSG DDPTGREEGD EKEKQLGDDA KNNKRKQESE SDGDSGSGEE
101: QNKRVRRAKG KEKDVASVAP QIDSGMFCNI PPELFLQIFK FLSSEDLISC ALVCRFMNVV ASDETLWRRL YCMRWGLSCN TKLRECAWKK LYIQQDREDM
201: VEFVRNTPTE FKEYYIQMQA SKRSQAPLPS EVNDDKVILD KTIADQVSSW KSSRGLTDDA VKGHSCSGNT CSYTQIGDAY ICEKTGRVHV CDDACREFVL
301: DQSSGLLLCT ISGHCFERWL CPDDEWDADD DTDLQQAGMT DEAEPFMGSG RFARAYQLGY SCADEKELEY ALRFC
101: QNKRVRRAKG KEKDVASVAP QIDSGMFCNI PPELFLQIFK FLSSEDLISC ALVCRFMNVV ASDETLWRRL YCMRWGLSCN TKLRECAWKK LYIQQDREDM
201: VEFVRNTPTE FKEYYIQMQA SKRSQAPLPS EVNDDKVILD KTIADQVSSW KSSRGLTDDA VKGHSCSGNT CSYTQIGDAY ICEKTGRVHV CDDACREFVL
301: DQSSGLLLCT ISGHCFERWL CPDDEWDADD DTDLQQAGMT DEAEPFMGSG RFARAYQLGY SCADEKELEY ALRFC
001: MSVSDEEDEC FARFLESEVS SVEDKEETKE PEAKRQRIEK GETKALEKDE DQKENGNKDK TDAKRIESGV FTNVPTELFR HILKFLSSED LVSCSLVCKF
101: LNFAAADESL WRRLYCIRWG LTLPSRKLRE SAWKKLYIDR DEQDMIELVR TCPSDFKEYY VHMQAAKRSQ APLPSQMVDD RIILDNTVLE QVSLWKKSKG
201: LTDKAVTGHI CLGTKCSYHQ IDDVFICKET GNVHVCDDNC KEVILSPEGD LMVCTISGVC SDTLLVQTEP DADGCYEEEA ELEAEVFTDK SRLARAFELG
301: YNCDDEQELE RTLRFC
101: LNFAAADESL WRRLYCIRWG LTLPSRKLRE SAWKKLYIDR DEQDMIELVR TCPSDFKEYY VHMQAAKRSQ APLPSQMVDD RIILDNTVLE QVSLWKKSKG
201: LTDKAVTGHI CLGTKCSYHQ IDDVFICKET GNVHVCDDNC KEVILSPEGD LMVCTISGVC SDTLLVQTEP DADGCYEEEA ELEAEVFTDK SRLARAFELG
301: YNCDDEQELE RTLRFC
Arabidopsis Description
SKIP31F-box protein SKIP31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHK0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.