CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G095390.2	Barley	cytosol	55.64	83.79
Zm00001d014742_P001	Maize	nucleus	87.93	83.13
Os06t0709100-01	Rice	nucleus	74.02	75.2
TraesCS7A01G408600.1	Wheat	cytosol, nucleus, plastid	72.18	71.61
TraesCS7B01G308300.4	Wheat	cytosol, mitochondrion, nucleus	71.92	71.54
TraesCS7D01G401900.4	Wheat	cytosol, mitochondrion, nucleus	71.65	71.09
HORVU7Hr1G095400.5	Barley	cytosol, mitochondrion, nucleus	71.39	65.54
VIT_02s0087g00790.t01	Wine grape	nucleus	49.61	61.97
KRH28992	Soybean	nucleus	50.39	59.63
KRH76466	Soybean	nucleus	50.39	59.26
CDY64948	Canola	nucleus	41.21	50.0
CDY39424	Canola	nucleus	41.21	50.0
Bra025080.1-P	Field mustard	nucleus	41.21	49.84
Bra027603.1-P	Field mustard	nucleus	40.68	49.84
CDY13058	Canola	nucleus	40.42	49.52
CDY23126	Canola	nucleus	40.16	48.57
AT5G45360.1	Thale cress	nucleus	40.16	48.42
PGSC0003DMT400047541	Potato	nucleus	48.82	47.94
PGSC0003DMT400004963	Potato	nucleus	49.34	45.19
Solyc08g075380.2.1	Tomato	nucleus	48.82	44.71
CDY35006	Canola	nucleus	12.6	41.38
GSMUA_Achr1P10670_001	Banana	cytosol	53.54	40.32

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	UniProt:A0A194YLG5	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016567	GO:GO:0019538	InterPro:IPR001810	EnsemblPlants:KXG20829
ProteinID:KXG20829	ProteinID:KXG20829.1	PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR22990	PANTHER:PTHR22990:SF27
SMART:SM00256	EnsemblPlantsGene:SORBI_3010G258800	SUPFAM:SSF81383	UniParc:UPI0001C80655	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:59597310..59600431

Molecular Weight (calculated)

42430.8 Da

IEP (calculated)

4.187

GRAVY (calculated)

-0.756

Length

381 amino acids

Sequence
(BLAST)

001: MADVQGDKEA GLEDDDFPDD GPLVPEDPGE GGEPRSGGDE EEEDDVDGLA SFLESEILSG SNDEDPIDQE QRKQEEDGGA AKNKRKQGSG SDGHGCSGSG
101: SEGEQTKRAR REEMRRQAKG KAVAPQIDTG MFSNIPPELF LQIFKFLSSE DLISCALVCR FMNAAASDET LWRRLYCMRW GLASNAKFRE CAWKNLYIQR
201: DREDMVEFVR NTPTEFKEYY IQMQAAKRSQ TPHPSEVNDD KVMLDKTVAD QVSSWKNSRG LTDEAVKGHS CSGNTCSYTQ IGDAYICEKT GRVHVCDDAC
301: REFVLDQSSG LLLCTISGHC FERWLCPDDE WEADDNFQDL QQAGVVDEAE PFMGSGRYAR AIMLGYNCTD EKELEDALGL C

Best Arabidopsis Sequence Match ( AT5G45360.1 )
(BLAST)

001: MSVSDEEDEC FARFLESEVS SVEDKEETKE PEAKRQRIEK GETKALEKDE DQKENGNKDK TDAKRIESGV FTNVPTELFR HILKFLSSED LVSCSLVCKF
101: LNFAAADESL WRRLYCIRWG LTLPSRKLRE SAWKKLYIDR DEQDMIELVR TCPSDFKEYY VHMQAAKRSQ APLPSQMVDD RIILDNTVLE QVSLWKKSKG
201: LTDKAVTGHI CLGTKCSYHQ IDDVFICKET GNVHVCDDNC KEVILSPEGD LMVCTISGVC SDTLLVQTEP DADGCYEEEA ELEAEVFTDK SRLARAFELG
301: YNCDDEQELE RTLRFC

Arabidopsis Description

SKIP31F-box protein SKIP31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHK0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.