Factsheet for HORVU7Hr1G095400.5

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G095390.2	Barley	cytosol	60.96	100.0
TraesCS7A01G408600.1	Wheat	cytosol, nucleus, plastid	89.16	96.35
TraesCS7B01G308300.4	Wheat	cytosol, mitochondrion, nucleus	88.92	96.34
TraesCS7D01G401900.4	Wheat	cytosol, mitochondrion, nucleus	88.92	96.09
Os06t0709100-01	Rice	nucleus	69.4	76.8
KXG20829	Sorghum	nucleus	65.54	71.39
Zm00001d014742_P001	Maize	nucleus	63.86	65.76
VIT_02s0087g00790.t01	Wine grape	nucleus	47.95	65.25
KRH76466	Soybean	nucleus	47.95	61.42
KRH28992	Soybean	nucleus	46.99	60.56
AT5G45360.1	Thale cress	nucleus	39.76	52.22
CDY64948	Canola	nucleus	39.04	51.59
Bra027603.1-P	Field mustard	nucleus	38.55	51.45
CDY13058	Canola	nucleus	38.31	51.13
CDY39424	Canola	nucleus	38.55	50.96
Bra025080.1-P	Field mustard	nucleus	38.55	50.79
CDY23126	Canola	nucleus	38.07	50.16
PGSC0003DMT400047541	Potato	nucleus	45.3	48.45
PGSC0003DMT400004963	Potato	nucleus	46.02	45.91
Solyc08g075380.2.1	Tomato	nucleus	45.54	45.43
CDY35006	Canola	nucleus	12.29	43.97
GSMUA_Achr1P10670_001	Banana	cytosol	51.08	41.9

Protein Annotations

EnsemblPlants:HORVU7Hr1G095400.5	EnsemblPlantsGene:HORVU7Hr1G095400	Gene3D:1.20.1280.50	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR22990	PANTHER:PTHR22990:SF27	PFAM:PF12937
PFscan:PS50181	SEG:seg	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI000B478135	UniProt:A0A287XF35
MapMan:19.2.2.8.1.4.6	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:582071431..582074841

Molecular Weight (calculated)

46082.0 Da

IEP (calculated)

4.262

GRAVY (calculated)

-0.726

Length

415 amino acids

Sequence
(BLAST)

001: PHQYLQSRVR RSGDPSVARW TAKRRTSMAD GRDLGDVAAA EPDPDEGQPD LEEEGELEAG GGGGGGEEEE DVDVDGLASF LEFEILSGSS EEDPLDLEEG
101: EEEKETGVND EAKNGKRKQD SLSEGDGSGS GSGSEDEHQK RARKEKGKGK VLTEGPPQID TGMFTNVPPE LFLQIFKFLS SEDLISCALV CRFMNAAASD
201: ETLWRRLYCM RWGLSSNATS NAKLRECAWK SLYIQQDRED MVEFVRYTPT EFKEYYIQMQ AAKRSQAPLP SEVNDDKIVL DKTVADQVSS WKSRRGLTDD
301: AVKGHSCSGS TCFYKQIGDA YICEKTGRVH VCDDACREFV LDQTSGLLVC TISGHCFERF LCPDDEWDTC DTDQQQGGVT DEAEPFMGSG RFARAYQLGY
401: SCADEKELEY ALRFC

Best Arabidopsis Sequence Match ( AT5G45360.1 )
(BLAST)

001: MSVSDEEDEC FARFLESEVS SVEDKEETKE PEAKRQRIEK GETKALEKDE DQKENGNKDK TDAKRIESGV FTNVPTELFR HILKFLSSED LVSCSLVCKF
101: LNFAAADESL WRRLYCIRWG LTLPSRKLRE SAWKKLYIDR DEQDMIELVR TCPSDFKEYY VHMQAAKRSQ APLPSQMVDD RIILDNTVLE QVSLWKKSKG
201: LTDKAVTGHI CLGTKCSYHQ IDDVFICKET GNVHVCDDNC KEVILSPEGD LMVCTISGVC SDTLLVQTEP DADGCYEEEA ELEAEVFTDK SRLARAFELG
301: YNCDDEQELE RTLRFC

Arabidopsis Description

SKIP31F-box protein SKIP31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHK0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.