Factsheet for Os01t0104600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G231100.1	Wheat	mitochondrion	91.98	91.98
TraesCS3A01G194600.1	Wheat	mitochondrion	91.59	91.59
EES13430	Sorghum	mitochondrion	91.39	91.39
TraesCS4D01G180900.3	Wheat	mitochondrion	89.24	89.24
HORVU3Hr1G044640.3	Barley	mitochondrion	83.56	88.59
Zm00001d020989_P011	Maize	plastid	88.06	83.64
TraesCS4A01G125100.1	Wheat	plastid	89.04	80.53
GSMUA_Achr7P07400_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	35.81	75.93
Solyc01g056340.2.1	Tomato	mitochondrion	70.25	68.64
VIT_15s0048g02140.t01	Wine grape	mitochondrion	70.25	67.61
KRH77746	Soybean	mitochondrion	70.25	66.98
KRH27796	Soybean	mitochondrion	70.06	66.79
KRH15950	Soybean	cytosol	51.27	65.34
PGSC0003DMT400080769	Potato	cytosol	37.77	64.98
Bra000702.1-P	Field mustard	mitochondrion, nucleus, plastid	65.56	62.38
CDX90747	Canola	mitochondrion, nucleus, plastid	65.56	62.38
CDY05087	Canola	plastid	65.17	62.13
AT4G10180.1	Thale cress	mitochondrion, nucleus, peroxisome	65.95	62.06
Zm00001d040485_P001	Maize	mitochondrion	18.0	61.74
KRH18185	Soybean	nucleus	8.41	58.11
Zm00001d024743_P001	Maize	cytosol	12.72	56.03

Protein Annotations

MapMan:19.2.2.8.3.3.2	EntrezGene:4326296	EMBL:AK058683	EMBL:AK100613	ProteinID:BAD44839.1	ProteinID:BAF03680.1
ProteinID:BAS69959.1	InterPro:De-etiolated_protein_1_Det1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	EnsemblPlantsGene:Os01g0104600	EnsemblPlants:Os01t0104600-01	PFAM:PF09737	PANTHER:PTHR13374	UniProt:Q658D0
UniParc:UPI000043A0E1	RefSeq:XP_015622108.1	:	:	:	:

Description

DE-ETIOLATED1Homolog of Arabidopsis DE-ETIOLATED1 (DET1), Modulation of the ABA signaling pathway and ABA biosynthesis, Regulation of chlorophyll content (Os01t0104600-01);Similar to Light-mediated development protein DET1 (Deetiolated1 homolog) (tDET1) (High pigmentation protein 2) (Protein dark green). (Os01t0104600-02)

Coordinates

chr1:-:248828..256872

Molecular Weight (calculated)

59129.9 Da

IEP (calculated)

7.819

GRAVY (calculated)

-0.314

Length

511 amino acids

Sequence
(BLAST)

001: MATFFRSANL ASRVFDRQFL SPRPGATVNT VRQFYENLVP SYTICDIDCP DYSFRKFTDD GNYLVAFSRN HQDLIVYRPI WPTFSCNEPC DSHDLPPKAK
101: KFDSFFKQLY SISLASSNEY ICKDFFLYME CHQFGLFATS TAQSNDSSAT EGAIHGVPSI EKITFYLVRL DDGAILDEKA FRNDFINLAH SIGAYLYEDL
201: LCIVSLRYQT IHVLQIRDSG NLVEVRKIGA FCQEDDELFL HSHGQAARGV SFLPGIKQRL LSFIFRKTWN EESDQTLRVQ HLKKKFYFHF QDYVDLIIWK
301: VQFLDRHHLF IKFGSVDGGV SRSTEQNSAF FAVYNMETTD IVSLYQNSSE ELYSLFEYFY DHFHTNPQNS SHGNFISSHS NNVHALDQLR TIKNKANSTS
401: QFVKKMMASL PYTCQSQSPS PYFDLSLFRY DEKLISAIDR HRHCTEHPIK FISVKQPNVV KFKIKPGSDS GASDSRAKRI SSFLFHPFFP LALSIQQTYM
501: QPTVVNLHFR R

Best Arabidopsis Sequence Match ( AT4G10180.1 )
(BLAST)

001: MFTSGNVTAR VFERQIRTPP PGASVNRARH FYENLVPSYT LYDVESPDHC FRKFTEDGLF LISFSRNHQE LIVYRPSWLT YSTTDDSTTT LPPLPRRASK
101: FDSFFTQLYS VNLASSNELI CKDFFLYHQT RRFGLFATST AQIHDSSSPS NDAVPGVPSI DKITFVLLRL DDGVVLDERV FLHDFVNLAH NMGVFLYDDL
201: LAILSLRYQR IHLLQIRDSG HLVDARAIGY FCREDDELFL NSSSQAMMSQ DKSKQQSLSG SKEDDTGENG LRHSLSQPSG SNSFLSGVKQ RLLSFIFREI
301: WNEESDNVMR VQSLKKKFYF HFQDYVDLII WKVQFLDRQH LLIKFGSVDG GVTRSADHHP AFFAVYNMET TDIVAFYQNS AEDLYQLFEQ FSDHFTVSSS
401: TPFMNFVTSH SNNVYALEQL KYTKNKSNSF SQFVKKMLLS LPFSCQSQSP SPYFDQSLFR FDEKLISAAD RHRQSSDNPI KFISRRQPQT LKFKIKPGPE
501: CGTADGRSKK ICSFLFHPHL PLAISIQQTL FMPPSVVNIH FRR

Arabidopsis Description

DET1Light-mediated development protein DET1 [Source:UniProtKB/Swiss-Prot;Acc:P48732]
SUBAcon: [nucleus,peroxisome,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.