Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0549400-01 | Rice | nucleus | 5.97 | 2.53 |
| Os02t0150000-00 | Rice | mitochondrion | 0.6 | 1.16 |
| Os01t0911100-01 | Rice | nucleus, plastid | 0.9 | 0.63 |
| Os01t0172200-01 | Rice | cytosol | 1.19 | 0.53 |
| Os03t0308500-01 | Rice | mitochondrion | 1.19 | 0.52 |
| Os08t0154200-01 | Rice | cytosol, nucleus | 0.3 | 0.47 |
| Os11t0599500-00 | Rice | nucleus, plasma membrane | 0.6 | 0.32 |
| Os03t0805200-01 | Rice | plastid | 0.6 | 0.31 |
| Os02t0150100-02 | Rice | cytosol | 0.3 | 0.22 |
| Os06t0602400-01 | Rice | nucleus, plasma membrane | 0.3 | 0.21 |
| Os01t0197200-01 | Rice | plasma membrane | 0.3 | 0.2 |
| Os07t0202100-01 | Rice | nucleus | 0.3 | 0.16 |
| Os08t0159900-01 | Rice | extracellular, nucleus | 0.3 | 0.1 |
| Os03t0708600-02 | Rice | nucleus | 0.0 | 0.0 |
| Os06t0697200-00 | Rice | cytosol | 0.0 | 0.0 |
| Os07t0301200-01 | Rice | cytosol | 0.0 | 0.0 |
| Os08t0154225-00 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4324874 | ProteinID:BAD82338.1 | ProteinID:BAD82426.1 | ProteinID:BAF07071.1 | ProteinID:BAS75835.1 |
| ProteinID:EAZ14577.1 | GO:GO:0000462 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0032040 |
| EnsemblPlantsGene:Os01g0911000 | EnsemblPlants:Os01t0911000-01 | PFAM:PF04000 | PANTHER:PTHR13237 | PANTHER:PTHR13237:SF7 | UniProt:Q5N7Y0 |
| InterPro:Sas10/Utp3/C1D | UniParc:UPI000049EA12 | RefSeq:XP_015648588.1 | SEG:seg | : | : |
Description
Sas10/Utp3/C1D domain containing protein. (Os01t0911000-01);Hypothetical conserved gene. (Os01t0911000-02)
Coordinates
chr1:-:39684691..39687171
Molecular Weight (calculated)
37783.9 Da
IEP (calculated)
9.436
GRAVY (calculated)
-0.947
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSGGTASPA GVAGDGAGGR GSVFRGDDAP KLLAALKEMK EGLDLVTGKV KALTRKVKKN QLPTADGIGY LEAKHHLLLS YCQDIVYYLL RKAKGLSVEG
101: HPVVRSLVEI RLFLEKIRPI DKKMEYQIQK LTNAADSGAA QEKVLNAEAK SKDQPKDDED LLKYRPNPDM MDSKIDPAGQ DNDGIYRPPK FIAATMDDED
201: KRHKQASRKD KTLARMATES SYFKEIIDDA ADRPEELKET AGDESREFTR YMRQRELQEK QEEELFTRAP LTKRDKQTEK WMRKELHGLR GLTDGFDLGI
301: NMFVDGDKDN DVGSTEPHFK SGGRRKHHKG KRKRH
101: HPVVRSLVEI RLFLEKIRPI DKKMEYQIQK LTNAADSGAA QEKVLNAEAK SKDQPKDDED LLKYRPNPDM MDSKIDPAGQ DNDGIYRPPK FIAATMDDED
201: KRHKQASRKD KTLARMATES SYFKEIIDDA ADRPEELKET AGDESREFTR YMRQRELQEK QEEELFTRAP LTKRDKQTEK WMRKELHGLR GLTDGFDLGI
301: NMFVDGDKDN DVGSTEPHFK SGGRRKHHKG KRKRH
001: MEEITKPVLV GIVKKEAPQL ASVLREMKNV LDVVRSKVEA LTALVKANSF PTAGGISYLE AKHLLLLSYC QDLVYYILRK AKGLSIDGHP LVRSLVEIRM
101: FLEKIRPIDK KLQYQIQKLT TAGGPVTELA HSEGKGSCEA QKSEDLSNYK PKPDLLADKE DDQEDDGVYR PPKFAPMSME DKTSKQERDA ARKEKHFFRQ
201: ATENTYMKDV LDDLEDRPEE IRDYYGVESN EQKRFMAQYE RQQKAEEELF TRAPRTKEDK KREKRLKSSS GLHELTENFY DDIKFLDKDG EKPRSFGRNK
301: RGGPFKKRKT RH
101: FLEKIRPIDK KLQYQIQKLT TAGGPVTELA HSEGKGSCEA QKSEDLSNYK PKPDLLADKE DDQEDDGVYR PPKFAPMSME DKTSKQERDA ARKEKHFFRQ
201: ATENTYMKDV LDDLEDRPEE IRDYYGVESN EQKRFMAQYE RQQKAEEELF TRAPRTKEDK KREKRLKSSS GLHELTENFY DDIKFLDKDG EKPRSFGRNK
301: RGGPFKKRKT RH
Arabidopsis Description
AT1G07840 protein [Source:UniProtKB/TrEMBL;Acc:Q93ZQ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.