Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0197200-01 | Rice | plasma membrane | 23.7 | 8.3 |
| Os06t0602400-01 | Rice | nucleus, plasma membrane | 23.12 | 8.26 |
| Os02t0150100-02 | Rice | cytosol | 20.23 | 7.61 |
| Os07t0301200-01 | Rice | cytosol | 21.97 | 7.42 |
| Os03t0805200-01 | Rice | plastid | 26.59 | 7.22 |
| Os07t0202100-01 | Rice | nucleus | 26.59 | 7.21 |
| PGSC0003DMT400071932 | Potato | cytosol | 4.62 | 7.21 |
| Os01t0911100-01 | Rice | nucleus, plastid | 19.65 | 7.13 |
| Os11t0599500-00 | Rice | nucleus, plasma membrane | 25.43 | 7.06 |
| Solyc09g015930.2.1 | Tomato | plastid | 22.54 | 6.99 |
| VIT_06s0004g08160.t01 | Wine grape | plastid | 22.54 | 6.87 |
| KRH30661 | Soybean | endoplasmic reticulum | 20.23 | 6.19 |
| KRG98124 | Soybean | endoplasmic reticulum | 20.23 | 6.13 |
| Os06t0697200-00 | Rice | cytosol | 20.23 | 5.65 |
| Os03t0308500-01 | Rice | mitochondrion | 24.86 | 5.58 |
| Os01t0172200-01 | Rice | cytosol | 24.28 | 5.53 |
| Os01t0549400-01 | Rice | nucleus | 24.86 | 5.43 |
| Os03t0708600-02 | Rice | nucleus | 21.39 | 5.03 |
| Os08t0154225-00 | Rice | cytosol | 12.72 | 3.7 |
| Os08t0159900-01 | Rice | extracellular, nucleus | 20.81 | 3.43 |
| Os01t0911000-01 | Rice | nucleus | 1.16 | 0.6 |
| Os08t0154200-01 | Rice | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| EMBL:AB332052 | EnsemblPlants:Os02t0150000-00 | EnsemblPlantsGene:Os02g0150000 | EntrezGene:4328307 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | ProteinID:BAS76997.1 | RefSeq:XP_015625085.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0000DF0557 |
| UniProt:A8R3L8 | MapMan:11.10.1.10.1 | : | : | : | : |
Description
Conserved hypothetical protein. (Os02t0150000-00)
Coordinates
chr2:-:2760942..2762882
Molecular Weight (calculated)
17668.7 Da
IEP (calculated)
12.549
GRAVY (calculated)
0.014
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTGRVRHKC TTQPMIFATS LRVKLVGATP LPARLSPPAP PASVVRACAC LPRLGIGASA MWRRGRAMRW RRRWKYSLPA ACLALVLLAA AAARGVPIGG
101: GGMAHTGGGR VVVASSTAAF DAAAAAASRC KKQRSSRGGA TGPAAAGRGW SPPAAAAADE RVVPTGSNPL HNR
101: GGMAHTGGGR VVVASSTAAF DAAAAAASRC KKQRSSRGGA TGPAAAGRGW SPPAAAAADE RVVPTGSNPL HNR
1: MKNKNMNPSR PRLLCLIVFL FLVIVLSKAS RIHVERRRFS SKPSGENREF LPSQPTFPVV DAGEILPDKR KVKTGSNPLH NKR
Arabidopsis Description
CLE20CLAVATA3/ESR (CLE)-related protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q3EDI6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.