Factsheet for Os03t0190000-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU93090	Sorghum	plastid	68.15	68.42
Zm00001d048224_P001	Maize	plastid	63.71	66.95
Zm00001d027998_P001	Maize	plastid	65.32	66.12
HORVU4Hr1G078500.2	Barley	plastid	58.87	48.18
KRH16774	Soybean	plastid	20.97	43.7
GSMUA_Achr8P18110_001	Banana	plastid	43.55	42.35
KRH72387	Soybean	nucleus	32.66	38.21
KRH62312	Soybean	nucleus	38.31	33.1
CDX79256	Canola	nucleus, plastid	33.06	32.8
CDY26860	Canola	nucleus, plastid	37.9	32.53
Bra008356.1-P	Field mustard	nucleus, plastid	37.9	32.53
PGSC0003DMT400097756	Potato	nucleus	41.94	32.4
Bra035028.1-P	Field mustard	nucleus, plastid	38.31	32.31
Solyc04g074520.1.1	Tomato	nucleus	41.94	32.2
KRH53024	Soybean	plastid	37.9	31.86
CDY14617	Canola	nucleus, plastid	37.5	31.85
VIT_18s0001g06350.t01	Wine grape	nucleus	40.32	29.85
AT1G78310.1	Thale cress	nucleus, plastid	37.1	29.58
CDX88437	Canola	nucleus, plastid	27.82	27.94
CDX87454	Canola	nucleus, plastid	28.23	27.24
Os10t0577200-01	Rice	cytosol, mitochondrion, plastid	27.42	19.54

Protein Annotations

MapMan:35.2	EntrezGene:9267313	ProteinID:BAH92023.1	ProteinID:BAS82709.1	UniProt:C7IZY4	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006883	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009987	GO:GO:0019725
GO:GO:0030007	GO:GO:0043433	GO:GO:1901001	EnsemblPlantsGene:Os03g0190000	EnsemblPlants:Os03t0190000-01	PFAM:PF05678
PANTHER:PTHR33783	PANTHER:PTHR33783:SF1	UniParc:UPI0001B66147	InterPro:VQ	RefSeq:XP_015627853.1	SEG:seg

Description

VQ domain containing protein. (Os03t0190000-01)

Coordinates

chr3:+:4694814..4695941

Molecular Weight (calculated)

25584.3 Da

IEP (calculated)

11.362

GRAVY (calculated)

-0.410

Length

248 amino acids

Sequence
(BLAST)

001: MVMDKSSLPP PPPPPASSAS AAAASSALKA LNKSSYKISK QTSSSSLASM KASQSPPPPP PHPRRPSPPP LPPPPAPPSS APAAVDHPPP QPPVYNIDKS
101: DFRDVVQKLT GSPCHLLPPQ AQPPAPAAAV SMLPPQPPPP TIMAPPPPPP PSAIPTRLHR IRPPPLAPPR PPPILQPAPP ALSPLPPLPA VCMTAESPIS
201: AYMRRLRGMP SPIHVPTSPL GFGCLPSPRT PPSPGVPMPA TSPRVRDP

Best Arabidopsis Sequence Match ( AT1G78310.1 )
(BLAST)

001: MDKSCNSSGD SSAVSASATS STGNNTTNRD HYLRQLNKLS HKISKPTNSS SSVSVANREI DLPPPPPLQI NQGNLHQHQP PVYNINKNDF RDVVQKLTGS
101: PAHERISAPP QQPIHHPKPQ QSSRLHRIRP PPLVHVINRP PGLLNDALIP QGSHHMNQNW TGVGFNLRPT APLSPLPPLP PVHAAAESPV SSYMRYLQNS
201: MFAIDSNRKE FSGLSPLAPL VSPRWYQQQE NAPPSQHNSF PPPHPPPPSS AVSQTVPTSI PAPPLFGCSS SPKSPYGLLS PSILLSPSSG QLGFPVSPTT
301: VPLPSPKYKG H

Arabidopsis Description

VQ9VQ motif-containing protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9F0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.