Factsheet for GSMUA_Achr8P18110_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU93090	Sorghum	plastid	47.06	48.58
Zm00001d027998_P001	Maize	plastid	44.31	46.12
Zm00001d048224_P001	Maize	plastid	41.18	44.49
Os03t0190000-01	Rice	plastid	42.35	43.55
KRH16774	Soybean	plastid	18.82	40.34
KRH72387	Soybean	nucleus	30.59	36.79
KRH62312	Soybean	nucleus	37.65	33.45
CDX79256	Canola	nucleus, plastid	31.37	32.0
CDY14617	Canola	nucleus, plastid	36.47	31.85
CDY26860	Canola	nucleus, plastid	35.69	31.49
Bra008356.1-P	Field mustard	nucleus, plastid	35.69	31.49
HORVU4Hr1G078500.2	Barley	plastid	37.25	31.35
KRH53024	Soybean	plastid	35.69	30.85
Bra035028.1-P	Field mustard	nucleus, plastid	34.9	30.27
PGSC0003DMT400097756	Potato	nucleus	36.47	28.97
GSMUA_Achr4P27300_001	Banana	cytosol	26.27	28.63
Solyc04g074520.1.1	Tomato	nucleus	35.69	28.17
AT1G78310.1	Thale cress	nucleus, plastid	33.33	27.33
VIT_18s0001g06350.t01	Wine grape	nucleus	35.69	27.16
CDX88437	Canola	nucleus, plastid	25.1	25.91
CDX87454	Canola	nucleus, plastid	25.49	25.29
GSMUA_Achr5P03460_001	Banana	nucleus	28.24	22.93

Protein Annotations

MapMan:35.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006883	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009987	GO:GO:0019725	GO:GO:0030007	GO:GO:0043433	GO:GO:1901001	EnsemblPlantsGene:GSMUA_Achr8G18110_001
EnsemblPlants:GSMUA_Achr8P18110_001	EnsemblPlants:GSMUA_Achr8T18110_001	UniProt:M0TRG4	PFAM:PF05678	PANTHER:PTHR33783	PANTHER:PTHR33783:SF1
UniParc:UPI00029574D2	InterPro:VQ	SEG:seg	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G18110_001]

Coordinates

chr8:-:21243917..21244684

Molecular Weight (calculated)

26223.6 Da

IEP (calculated)

10.735

GRAVY (calculated)

-0.316

Length

255 amino acids

Sequence
(BLAST)

001: MEKTHRCSGT TAAANASSLN CDANAGTLSG DGGKTRSNGI QSSLKSLNRA SYKISKPLPR NPVADPTPVA ARAAPVPKLP ETAAGGGGGP PYQPQPPVYN
101: IDKNDFRDVV QKLTGSPAYH QSRPQPAEAP PLPPPRPCSA GPPSRLHRIR PPPLAQLSPS QTPPVPAPPL LSPLPPLPAV SAAAESPISA YMRRLRSVGV
201: PSALALSPTL APTLPLGMGC LLSPRTAFQM MIAAPGMQFP ASPGVQLASP RLGDP

Best Arabidopsis Sequence Match ( AT1G78310.1 )
(BLAST)

001: MDKSCNSSGD SSAVSASATS STGNNTTNRD HYLRQLNKLS HKISKPTNSS SSVSVANREI DLPPPPPLQI NQGNLHQHQP PVYNINKNDF RDVVQKLTGS
101: PAHERISAPP QQPIHHPKPQ QSSRLHRIRP PPLVHVINRP PGLLNDALIP QGSHHMNQNW TGVGFNLRPT APLSPLPPLP PVHAAAESPV SSYMRYLQNS
201: MFAIDSNRKE FSGLSPLAPL VSPRWYQQQE NAPPSQHNSF PPPHPPPPSS AVSQTVPTSI PAPPLFGCSS SPKSPYGLLS PSILLSPSSG QLGFPVSPTT
301: VPLPSPKYKG H

Arabidopsis Description

VQ9VQ motif-containing protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9F0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.