Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048224_P001 | Maize | plastid | 73.06 | 75.85 |
| OQU93090 | Sorghum | plastid | 73.47 | 72.87 |
| Os03t0190000-01 | Rice | plastid | 66.12 | 65.32 |
| HORVU4Hr1G078500.2 | Barley | plastid | 59.18 | 47.85 |
| KRH16774 | Soybean | plastid | 21.63 | 44.54 |
| GSMUA_Achr8P18110_001 | Banana | plastid | 46.12 | 44.31 |
| KRH72387 | Soybean | nucleus | 32.65 | 37.74 |
| KRH62312 | Soybean | nucleus | 38.78 | 33.1 |
| CDX79256 | Canola | nucleus, plastid | 32.65 | 32.0 |
| KRH53024 | Soybean | plastid | 38.37 | 31.86 |
| CDY26860 | Canola | nucleus, plastid | 37.55 | 31.83 |
| Bra008356.1-P | Field mustard | nucleus, plastid | 37.55 | 31.83 |
| PGSC0003DMT400097756 | Potato | nucleus | 41.63 | 31.78 |
| Bra035028.1-P | Field mustard | nucleus, plastid | 37.55 | 31.29 |
| Solyc04g074520.1.1 | Tomato | nucleus | 40.82 | 30.96 |
| CDY14617 | Canola | nucleus, plastid | 36.33 | 30.48 |
| VIT_18s0001g06350.t01 | Wine grape | nucleus | 39.59 | 28.96 |
| AT1G78310.1 | Thale cress | nucleus, plastid | 36.73 | 28.94 |
| CDX88437 | Canola | nucleus, plastid | 27.76 | 27.53 |
| Zm00001d030098_P001 | Maize | plastid | 33.88 | 26.95 |
| CDX87454 | Canola | nucleus, plastid | 27.35 | 26.07 |
Protein Annotations
| EnsemblPlants:Zm00001d027998_P001 | EnsemblPlants:Zm00001d027998_T001 | EnsemblPlantsGene:Zm00001d027998 | EntrezGene:103631839 | InterPro:VQ | PANTHER:PTHR33783 |
| PANTHER:PTHR33783:SF1 | PFAM:PF05678 | PRINTS:PR01217 | ProteinID:ONL94451.1 | SEG:seg | UniParc:UPI0002214F4D |
| UniProt:A0A1D6JR70 | MapMan:35.2 | : | : | : | : |
Description
VQ motif-containing protein 9
Coordinates
chr1:+:19887017..19887754
Molecular Weight (calculated)
25391.1 Da
IEP (calculated)
11.690
GRAVY (calculated)
-0.460
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMDKSNLPQ PPPPPPSSAS SLKSLNKASY KISKQSSSAS SAPSPAPPST MRAPSPPPPA PRPPAPLPPP QASSVPADHP PPQPPVYNID KSDFRDVVQK
101: LTGSPSHLLP PQPAAAPAPA PVMAPPPPPL MARPPPLPHT MAPPPPPPTA IPSRLHRIRP PPLAPPRPPP ILQPAPPALS PLPPLPAVCM TAESPISAYM
201: RRLRGMPSPI HVPTSPLGFG CLPSPRTPPS PGVPMPATSP RVRDP
101: LTGSPSHLLP PQPAAAPAPA PVMAPPPPPL MARPPPLPHT MAPPPPPPTA IPSRLHRIRP PPLAPPRPPP ILQPAPPALS PLPPLPAVCM TAESPISAYM
201: RRLRGMPSPI HVPTSPLGFG CLPSPRTPPS PGVPMPATSP RVRDP
001: MDKSCNSSGD SSAVSASATS STGNNTTNRD HYLRQLNKLS HKISKPTNSS SSVSVANREI DLPPPPPLQI NQGNLHQHQP PVYNINKNDF RDVVQKLTGS
101: PAHERISAPP QQPIHHPKPQ QSSRLHRIRP PPLVHVINRP PGLLNDALIP QGSHHMNQNW TGVGFNLRPT APLSPLPPLP PVHAAAESPV SSYMRYLQNS
201: MFAIDSNRKE FSGLSPLAPL VSPRWYQQQE NAPPSQHNSF PPPHPPPPSS AVSQTVPTSI PAPPLFGCSS SPKSPYGLLS PSILLSPSSG QLGFPVSPTT
301: VPLPSPKYKG H
101: PAHERISAPP QQPIHHPKPQ QSSRLHRIRP PPLVHVINRP PGLLNDALIP QGSHHMNQNW TGVGFNLRPT APLSPLPPLP PVHAAAESPV SSYMRYLQNS
201: MFAIDSNRKE FSGLSPLAPL VSPRWYQQQE NAPPSQHNSF PPPHPPPPSS AVSQTVPTSI PAPPLFGCSS SPKSPYGLLS PSILLSPSSG QLGFPVSPTT
301: VPLPSPKYKG H
Arabidopsis Description
VQ9VQ motif-containing protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9F0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.