Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 6
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72387 | Soybean | nucleus | 83.19 | 46.7 |
| KRH62312 | Soybean | nucleus | 55.46 | 23.0 |
| OQU93090 | Sorghum | plastid | 45.38 | 21.86 |
| KRH53024 | Soybean | plastid | 53.78 | 21.69 |
| Zm00001d027998_P001 | Maize | plastid | 44.54 | 21.63 |
| Zm00001d048224_P001 | Maize | plastid | 42.02 | 21.19 |
| Os03t0190000-01 | Rice | plastid | 43.7 | 20.97 |
| CDX79256 | Canola | nucleus, plastid | 42.86 | 20.4 |
| CDX88437 | Canola | nucleus, plastid | 42.02 | 20.24 |
| PGSC0003DMT400097756 | Potato | nucleus | 53.78 | 19.94 |
| Bra008356.1-P | Field mustard | nucleus, plastid | 47.9 | 19.72 |
| CDY26860 | Canola | nucleus, plastid | 47.9 | 19.72 |
| Solyc04g074520.1.1 | Tomato | nucleus | 52.94 | 19.5 |
| CDY14617 | Canola | nucleus, plastid | 46.22 | 18.84 |
| GSMUA_Achr8P18110_001 | Banana | plastid | 40.34 | 18.82 |
| VIT_18s0001g06350.t01 | Wine grape | nucleus | 52.94 | 18.81 |
| Bra035028.1-P | Field mustard | nucleus, plastid | 46.22 | 18.71 |
| CDX87454 | Canola | nucleus, plastid | 40.34 | 18.68 |
| AT1G78310.1 | Thale cress | nucleus, plastid | 47.06 | 18.01 |
| KRH75619 | Soybean | nucleus | 39.5 | 16.26 |
| HORVU4Hr1G078500.2 | Barley | plastid | 41.18 | 16.17 |
| KRH45443 | Soybean | nucleus | 38.66 | 15.75 |
| KRH74422 | Soybean | nucleus | 41.18 | 15.41 |
| KRH45449 | Soybean | nucleus | 37.82 | 15.05 |
| KRH45444 | Soybean | nucleus | 38.66 | 12.74 |
Protein Annotations
| EMBL:ACUP02009013 | EnsemblPlants:KRH16774 | EnsemblPlantsGene:GLYMA_14G177000 | EntrezGene:102660139 | PANTHER:PTHR33783 | PANTHER:PTHR33783:SF1 |
| ProteinID:KRH16774 | ProteinID:KRH16774.1 | SEG:seg | UniParc:UPI000296655F | UniProt:K7M7P9 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr14:-:43648784..43649143
Molecular Weight (calculated)
12756.2 Da
IEP (calculated)
11.367
GRAVY (calculated)
-0.313
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQKLTGSPG HSPQPKPVST SRLHRLRPPP LPQVFSNRPP PPNSGNVVVA PPSPLPPFPT VHAESPVSAY MRSFQRNSVA SSSESEFQIP FSPVTFGCIN
101: SLVPLSPTVP VSSPGWRDL
101: SLVPLSPTVP VSSPGWRDL
001: MDKSCNSSGD SSAVSASATS STGNNTTNRD HYLRQLNKLS HKISKPTNSS SSVSVANREI DLPPPPPLQI NQGNLHQHQP PVYNINKNDF RDVVQKLTGS
101: PAHERISAPP QQPIHHPKPQ QSSRLHRIRP PPLVHVINRP PGLLNDALIP QGSHHMNQNW TGVGFNLRPT APLSPLPPLP PVHAAAESPV SSYMRYLQNS
201: MFAIDSNRKE FSGLSPLAPL VSPRWYQQQE NAPPSQHNSF PPPHPPPPSS AVSQTVPTSI PAPPLFGCSS SPKSPYGLLS PSILLSPSSG QLGFPVSPTT
301: VPLPSPKYKG H
101: PAHERISAPP QQPIHHPKPQ QSSRLHRIRP PPLVHVINRP PGLLNDALIP QGSHHMNQNW TGVGFNLRPT APLSPLPPLP PVHAAAESPV SSYMRYLQNS
201: MFAIDSNRKE FSGLSPLAPL VSPRWYQQQE NAPPSQHNSF PPPHPPPPSS AVSQTVPTSI PAPPLFGCSS SPKSPYGLLS PSILLSPSSG QLGFPVSPTT
301: VPLPSPKYKG H
Arabidopsis Description
VQ9VQ motif-containing protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9F0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.