CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16774	Soybean	plastid	46.7	83.19
KRH62312	Soybean	nucleus	50.94	37.63
KRH53024	Soybean	plastid	47.64	34.24
CDX79256	Canola	nucleus, plastid	39.15	33.2
Os03t0190000-01	Rice	plastid	38.21	32.66
Zm00001d027998_P001	Maize	plastid	37.74	32.65
OQU93090	Sorghum	plastid	37.74	32.39
Zm00001d048224_P001	Maize	plastid	35.85	32.2
Bra008356.1-P	Field mustard	nucleus, plastid	43.87	32.18
CDY26860	Canola	nucleus, plastid	43.87	32.18
CDY14617	Canola	nucleus, plastid	42.92	31.16
Bra035028.1-P	Field mustard	nucleus, plastid	42.92	30.95
AT1G78310.1	Thale cress	nucleus, plastid	45.28	30.87
Solyc04g074520.1.1	Tomato	nucleus	46.7	30.65
GSMUA_Achr8P18110_001	Banana	plastid	36.79	30.59
PGSC0003DMT400097756	Potato	nucleus	46.23	30.53
VIT_18s0001g06350.t01	Wine grape	nucleus	46.7	29.55
CDX88437	Canola	nucleus, plastid	32.55	27.94
CDX87454	Canola	nucleus, plastid	33.02	27.24
KRH45443	Soybean	nucleus	36.32	26.37
KRH75619	Soybean	nucleus	34.91	25.61
KRH45449	Soybean	nucleus	35.38	25.08
KRH74422	Soybean	nucleus	36.32	24.21
HORVU4Hr1G078500.2	Barley	plastid	34.43	24.09
KRH45444	Soybean	nucleus	35.85	21.05

Protein Annotations

EMBL:ACUP02001204	EnsemblPlants:KRH72387	EnsemblPlantsGene:GLYMA_02G208800	EntrezGene:102665762	InterPro:VQ	PANTHER:PTHR33783
PANTHER:PTHR33783:SF1	PFAM:PF05678	ProteinID:KRH72387	ProteinID:KRH72387.1	SEG:seg	UniParc:UPI00023BC11F
UniProt:K7K9U2	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:39393500..39394691

Molecular Weight (calculated)

23347.5 Da

IEP (calculated)

10.551

GRAVY (calculated)

-0.702

Length

212 amino acids

Sequence
(BLAST)

001: MDHKHCQTPL DSSSSFPTTT STTNRDQYLK QLNKLSHNIS KPNNIKKPTF FESSQSLTHN NTFNKQYALP SESQPQVYNI SKNDFRDMVQ KLTGSPGHTP
101: QPKPVATSRL HRLRPPPLPQ VVSHRPPPPN SGKVAVAPPS PLPPFPTVHA ESPVSAYMRS FLRNSVPSSS SESEFQLPFS PVTFGCFNSL GGGSPIPLSP
201: TVPVSSPRWR DL

Best Arabidopsis Sequence Match ( AT1G78310.1 )
(BLAST)

001: MDKSCNSSGD SSAVSASATS STGNNTTNRD HYLRQLNKLS HKISKPTNSS SSVSVANREI DLPPPPPLQI NQGNLHQHQP PVYNINKNDF RDVVQKLTGS
101: PAHERISAPP QQPIHHPKPQ QSSRLHRIRP PPLVHVINRP PGLLNDALIP QGSHHMNQNW TGVGFNLRPT APLSPLPPLP PVHAAAESPV SSYMRYLQNS
201: MFAIDSNRKE FSGLSPLAPL VSPRWYQQQE NAPPSQHNSF PPPHPPPPSS AVSQTVPTSI PAPPLFGCSS SPKSPYGLLS PSILLSPSSG QLGFPVSPTT
301: VPLPSPKYKG H

Arabidopsis Description

VQ9VQ motif-containing protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9F0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.