CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45449	Soybean	nucleus	96.23	93.98
KRH75619	Soybean	nucleus	80.14	80.97
KRH45444	Soybean	nucleus	96.92	78.39
KRH74422	Soybean	nucleus	66.44	61.01
VIT_02s0012g01280.t01	Wine grape	nucleus	50.68	51.75
TraesCS1D01G198200.1	Wheat	cytosol	26.71	48.45
TraesCS1B01G209400.1	Wheat	cytosol	26.71	48.45
PGSC0003DMT400005396	Potato	nucleus	56.85	48.12
TraesCS1A01G194500.1	Wheat	cytosol	25.68	46.58
CDX79596	Canola	nucleus	46.58	45.48
PGSC0003DMT400092612	Potato	nucleus	57.19	45.01
Solyc06g061190.1.1	Tomato	nucleus	55.82	44.29
HORVU1Hr1G050850.1	Barley	plastid	45.55	43.32
Zm00001d030098_P001	Maize	plastid	45.55	43.18
CDX84225	Canola	nucleus	50.68	43.02
CDY31674	Canola	nucleus	51.03	42.21
EER91871	Sorghum	plastid	45.89	42.01
Bra017329.1-P	Field mustard	nucleus	48.29	41.23
GSMUA_Achr5P03460_001	Banana	nucleus	42.47	39.49
KRH16774	Soybean	plastid	15.75	38.66
AT1G32610.1	Thale cress	nucleus	38.01	38.14
Bra005358.1-P	Field mustard	nucleus	50.68	37.56
AT2G35230.1	Thale cress	nucleus	51.71	37.56
KRH72387	Soybean	nucleus	26.37	36.32
GSMUA_Achr4P27300_001	Banana	cytosol	28.08	35.04
CDX84616	Canola	nucleus	48.29	34.64
KRH62312	Soybean	nucleus	32.53	33.1
Bra023004.1-P	Field mustard	nucleus	48.63	32.49
Os10t0577200-01	Rice	cytosol, mitochondrion, plastid	38.36	32.18
KRH53024	Soybean	plastid	32.19	31.86

Protein Annotations

EMBL:ACUP02005227	EnsemblPlants:KRH45443	EnsemblPlantsGene:GLYMA_08G272000	EntrezGene:100817229	InterPro:VQ	PANTHER:PTHR33783
PANTHER:PTHR33783:SF2	PFAM:PF05678	ProteinID:KRH45441.1	ProteinID:KRH45442.1	ProteinID:KRH45443	ProteinID:KRH45443.1
SEG:seg	UniParc:UPI00023380C9	UniProt:I1KX28	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr8:+:35626727..35628570

Molecular Weight (calculated)

32002.0 Da

IEP (calculated)

10.926

GRAVY (calculated)

-0.843

Length

292 amino acids

Sequence
(BLAST)

001: MDESKNRHND NLGVNKMGKN IRKSPLHQPN YGNNNNSSMN GGRQQQQQPQ PQVYNISKND FRDIVQQLTG SPSQSQDHPQ SKPPQNQNNS PKPQSMRLQK
101: IRPPPLPYVR PPLHTTLPAA RPAHFRQQPS PNPNNIAESP ISAYMRYLEH SITDPTSRGA QFQPHRHPAS SALLPNPPMM PLNATNPLPP PPSIAAVPSP
201: QPNGPPILPL PSPTSQFLLP SPNGYMNFLS PQSGYPPLLS PGIQFPSPFT PHFPLSPFAQ SGILGPGPQP PLSPGLFPLS PSGFFPMTSP RW

Best Arabidopsis Sequence Match ( AT2G35230.3 )
(BLAST)

001: MDRPRQNDHL GVNRIGKNIR KSPLHQSTFA ASTSNGAAPR LQTQPQVYNI SKNDFRSIVQ QLTGSPSRES LPRPPQNNSL RPQNTRLQRI RPSPLTQLNR
101: PAVPLPSMAP PQSHPQFARQ PPHQPPFPQT TQQPMMGHRD QFWSNTAESP VSEYMRYLQS SLGDSGPNAN QMQPGHEQRP YIPGHEQRPY VPGNEQQPYM
201: PGNEQRPYIP GHEQRSYMPA QSQSQSQPQP QPQPQQHMMP GPQPRMNMQG PLQPNQYLPP PGLVPSPVPH NLPSPRFNAP VPVTPTQPSP MFSQMYGGFP
301: SPRYNGFGPL QSPTSQFLQP SPTGYPNMFS PRSPYPLLSP GVQYPQPLTP NFSFSQIAQQ GSLGPGAGPS QGPPQPPPSP GLMFPLSPSG FFPMPSPRWN
401: DY

Arabidopsis Description

IKU1IKU1 [Source:UniProtKB/TrEMBL;Acc:A0A178VN96]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.