Factsheet for Os10t0577200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G194500.1	Wheat	cytosol	36.78	79.5
TraesCS1D01G198200.1	Wheat	cytosol	36.49	78.88
TraesCS1B01G209400.1	Wheat	cytosol	36.49	78.88
HORVU1Hr1G050850.1	Barley	plastid	53.16	60.26
Zm00001d030098_P001	Maize	plastid	52.87	59.74
EER91871	Sorghum	plastid	52.3	57.05
VIT_02s0012g01280.t01	Wine grape	nucleus	31.61	38.46
KRH45443	Soybean	nucleus	32.18	38.36
KRH75619	Soybean	nucleus	31.03	37.37
GSMUA_Achr5P03460_001	Banana	nucleus	33.62	37.26
KRH45449	Soybean	nucleus	31.61	36.79
KRH74422	Soybean	nucleus	32.18	35.22
PGSC0003DMT400005396	Potato	nucleus	33.91	34.2
Solyc06g061190.1.1	Tomato	nucleus	32.76	30.98
KRH45444	Soybean	nucleus	31.9	30.75
PGSC0003DMT400092612	Potato	nucleus	32.76	30.73
Bra024996.1-P	Field mustard	nucleus	19.54	29.82
CDX79596	Canola	nucleus	25.57	29.77
GSMUA_Achr4P27300_001	Banana	cytosol	19.83	29.49
CDY58504	Canola	nucleus	19.25	29.39
CDX77690	Canola	nucleus	19.25	29.13
CDY37148	Canola	cytosol	18.68	28.76
CDX84225	Canola	nucleus	27.87	28.2
Bra022063.1-P	Field mustard	cytosol	18.39	27.83
AT1G32610.1	Thale cress	nucleus	22.99	27.49
Bra017329.1-P	Field mustard	nucleus	27.01	27.49
CDY31674	Canola	nucleus	27.87	27.48
Os03t0190000-01	Rice	plastid	19.54	27.42
AT5G46780.1	Thale cress	nucleus	18.39	27.0
Bra005358.1-P	Field mustard	nucleus	27.87	24.62
AT2G35230.1	Thale cress	nucleus	27.87	24.13
CDX84616	Canola	nucleus	25.29	21.62
CDX87678	Canola	endoplasmic reticulum, extracellular, plastid	18.1	21.5
Bra023004.1-P	Field mustard	nucleus	25.57	20.37

Protein Annotations

EnsemblPlants:Os10t0577200-01	EnsemblPlantsGene:Os10g0577200	PANTHER:PTHR33783	PANTHER:PTHR33783:SF2	ProteinID:BAF27326.1	ProteinID:BAT12211.1
SEG:seg	UniParc:UPI0000DD9AAD	UniProt:Q0IVD9	MapMan:35.2	:	:

Description

Conserved hypothetical protein. (Os10t0577200-01)

Coordinates

chr10:-:22997462..22998785

Molecular Weight (calculated)

36500.0 Da

IEP (calculated)

12.368

GRAVY (calculated)

-0.545

Length

348 amino acids

Sequence
(BLAST)

001: CASRLPLAPP STPTPPIRRL HALPFLPGLR LASPPRPIAP PCCSPPPIPS PVHRHGSQQQ QQQQQQPASR GQQARPQHPQ GHATAAAAAA AVTPAAAAAA
101: GLQHQQEPVP RHSPAAHRGD PLPASPPQPQ HQHHPHRPLP PQHQQPKPPS MRLQKIRPPP ISTPVARPPP VHNHQIPNPN HNPAFHRPPP PQPMPMPMPG
201: PPVWADSPVT AYMRILENSL FSATPPGAAA AAAAAAAAAT GQQAPPHHPH PPPPPPVPSP GILPSPSGFL NLLSPTPRSP YPLLSPGFQH PGPLTPNFPA
301: LSPLPGTGIL GPGPMAPPSP GLWFPQSPSG LLSPSGFLPI LSPRWREM

Best Arabidopsis Sequence Match ( AT2G35230.3 )
(BLAST)

001: MDRPRQNDHL GVNRIGKNIR KSPLHQSTFA ASTSNGAAPR LQTQPQVYNI SKNDFRSIVQ QLTGSPSRES LPRPPQNNSL RPQNTRLQRI RPSPLTQLNR
101: PAVPLPSMAP PQSHPQFARQ PPHQPPFPQT TQQPMMGHRD QFWSNTAESP VSEYMRYLQS SLGDSGPNAN QMQPGHEQRP YIPGHEQRPY VPGNEQQPYM
201: PGNEQRPYIP GHEQRSYMPA QSQSQSQPQP QPQPQQHMMP GPQPRMNMQG PLQPNQYLPP PGLVPSPVPH NLPSPRFNAP VPVTPTQPSP MFSQMYGGFP
301: SPRYNGFGPL QSPTSQFLQP SPTGYPNMFS PRSPYPLLSP GVQYPQPLTP NFSFSQIAQQ GSLGPGAGPS QGPPQPPPSP GLMFPLSPSG FFPMPSPRWN
401: DY

Arabidopsis Description

IKU1IKU1 [Source:UniProtKB/TrEMBL;Acc:A0A178VN96]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.