Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 5
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os04t0669200-01 | |
| Os06t0691100-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G44040.1 | Os04t0669200-01 | AT3G20310.1 | 21798944 |
| AT2G44040.1 | Os06t0691100-00 | AT3G20310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95181 | Sorghum | mitochondrion | 80.31 | 80.06 |
| TraesCS4B01G226100.1 | Wheat | mitochondrion | 79.69 | 79.45 |
| TraesCS4D01G226800.1 | Wheat | mitochondrion | 79.38 | 79.14 |
| KRH06536 | Soybean | cytosol | 46.46 | 79.06 |
| TraesCS4A01G069000.2 | Wheat | mitochondrion | 79.38 | 78.9 |
| Zm00001d047935_P003 | Maize | plasma membrane | 77.54 | 76.6 |
| HORVU4Hr1G063600.3 | Barley | mitochondrion | 75.38 | 71.85 |
| GSMUA_Achr4P25630_001 | Banana | mitochondrion | 61.85 | 67.91 |
| GSMUA_Achr1P02550_001 | Banana | plastid | 67.38 | 66.16 |
| Os02t0436400-01 | Rice | plastid | 62.46 | 59.18 |
| PGSC0003DMT400073601 | Potato | plastid | 59.08 | 57.83 |
| Solyc01g098380.2.1 | Tomato | plastid | 59.08 | 57.83 |
| KRH47978 | Soybean | mitochondrion | 59.38 | 56.1 |
| VIT_05s0094g01480.t01 | Wine grape | mitochondrion, plastid | 60.0 | 55.87 |
| CDY30450 | Canola | plastid | 56.31 | 53.82 |
| AT2G44040.1 | Thale cress | plastid | 57.23 | 53.6 |
| Bra037671.1-P | Field mustard | plastid | 56.0 | 53.53 |
| AT3G59890.1 | Thale cress | plastid | 57.23 | 53.3 |
| CDX95582 | Canola | plastid | 56.92 | 53.16 |
| CDX83447 | Canola | plastid | 56.92 | 53.16 |
| Bra000338.1-P | Field mustard | plastid | 56.92 | 53.16 |
| CDY23412 | Canola | plastid | 56.62 | 53.03 |
| KRH06535 | Soybean | mitochondrion, plastid | 13.85 | 29.61 |
Protein Annotations
| KEGG:00261+1.17.1.8 | KEGG:00300+1.17.1.8 | Gene3D:3.30.360.10 | Gene3D:3.40.50.720 | MapMan:4.1.2.2.3.2 | EntrezGene:4332231 |
| ProteinID:ABF94935.1 | ProteinID:ABF94936.1 | ProteinID:ABF94937.1 | EMBL:AK059346 | EMBL:AK102253 | ProteinID:BAF11450.1 |
| ProteinID:BAS83232.1 | ProteinID:BAS83233.1 | ProteinID:BAS83234.1 | InterPro:DHDPR_bac | InterPro:DapB_C | InterPro:DapB_N |
| InterPro:Dihydrodipicolinate_Rdtase_pln | ProteinID:EEE58685.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008652 | GO:GO:0008839 | GO:GO:0009058 | GO:GO:0009085 | GO:GO:0009089 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0019877 | GO:GO:0055114 |
| GO:GO:0070402 | InterPro:NAD(P)-bd_dom_sf | EnsemblPlantsGene:Os03g0245100 | EnsemblPlants:Os03t0245100-01 | PFAM:PF01113 | PFAM:PF05173 |
| PANTHER:PTHR20836 | PANTHER:PTHR20836:SF3 | UniProt:Q10P67 | SUPFAM:SSF51735 | TIGRFAMs:TIGR02130 | UniParc:UPI0000DB4912 |
| RefSeq:XP_015631811.1 | : | : | : | : | : |
Description
DAPB2NAD(P)-binding domain containing protein. (Os03t0245100-01);Similar to Dihydrodipicolinate reductase. (Os03t0245100-02);NAD(P)-binding domain containing protein. (Os03t0245100-03)
Coordinates
chr3:+:7671601..7675885
Molecular Weight (calculated)
35575.6 Da
IEP (calculated)
6.435
GRAVY (calculated)
-0.080
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSLRPPCTL SPAPWRRRRT LHGAAGTPQR VSVAAPSAIV EAVSPPARFS FPILVNGCTG KMGLSVAEAV TSSGLHLVPI SFSSRDTLDR TVRVGHTDVR
101: IYGPSAREDV LSSVIDEFPD VVVVDYTAPD SVNANAELYC KLGLPFVMGT TGGDRQLLYK SVQDSNNYAL ISPQMGKQVV AFLAAMEIMA EQFPGAFSGY
201: HLEVLESHQA GKLDISGTAK AVIACFEKLG VSYDMNRMVK IRDPEQQLEM VGVPEEHIEG HAFHLYHLTS PDDSVSFEFQ HNVCGRSIYA EGSVDAAMFL
301: HRKVRSNDSK RIYDMIDVLR EGSMR
101: IYGPSAREDV LSSVIDEFPD VVVVDYTAPD SVNANAELYC KLGLPFVMGT TGGDRQLLYK SVQDSNNYAL ISPQMGKQVV AFLAAMEIMA EQFPGAFSGY
201: HLEVLESHQA GKLDISGTAK AVIACFEKLG VSYDMNRMVK IRDPEQQLEM VGVPEEHIEG HAFHLYHLTS PDDSVSFEFQ HNVCGRSIYA EGSVDAAMFL
301: HRKVRSNDSK RIYDMIDVLR EGSMR
001: MAASSVFLHR PVHPHFSFSS RTNQMVPLGF KGRVSFIGNV KRCFPVVLSM GKSETFEEAG NSVAPGNGIS IMVNGCSGKM GKAVIKAADS AGVNIVPTSF
101: GSVEEAGQTV EVCGKEILVH GPTEREKVLS SVFEKYPELI VVDYTIPSAV NDNAELYGKV GVPFVMGTTG GDRTRLYKTV EESKIYAVIS PQMGKQVVAF
201: LAAMEIMSEQ FPGAFAGYSL EVMESHQASK LDASGTAKAV ISCFQKLGVS YDMDQIQLIR DPKQQIEVVG VPEEHVSGHA FHLYHLTSPD KTVSFEFQHN
301: VCGRSIYAEG TVDAVLFLAK KIRSKAEKRI YNMIDVLREG NMR
101: GSVEEAGQTV EVCGKEILVH GPTEREKVLS SVFEKYPELI VVDYTIPSAV NDNAELYGKV GVPFVMGTTG GDRTRLYKTV EESKIYAVIS PQMGKQVVAF
201: LAAMEIMSEQ FPGAFAGYSL EVMESHQASK LDASGTAKAV ISCFQKLGVS YDMDQIQLIR DPKQQIEVVG VPEEHVSGHA FHLYHLTSPD KTVSFEFQHN
301: VCGRSIYAEG TVDAVLFLAK KIRSKAEKRI YNMIDVLREG NMR
Arabidopsis Description
DAPB24-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LB01]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.