Factsheet for AT3G59890.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G44040.1	Thale cress	plastid	84.81	85.3
KRH06536	Soybean	cytosol	46.42	84.82
Solyc01g098380.2.1	Tomato	plastid	62.75	65.96
PGSC0003DMT400073601	Potato	plastid	62.75	65.96
KRH47978	Soybean	mitochondrion	63.61	64.53
VIT_05s0094g01480.t01	Wine grape	mitochondrion, plastid	63.9	63.9
GSMUA_Achr4P25630_001	Banana	mitochondrion	54.15	63.85
GSMUA_Achr1P02550_001	Banana	plastid	59.31	62.54
Os03t0245100-01	Rice	mitochondrion	53.3	57.23
OQU80721	Sorghum	plastid	56.16	57.14
TraesCS4D01G226800.1	Wheat	mitochondrion	53.3	57.06
TraesCS4A01G069000.2	Wheat	mitochondrion	53.01	56.57
Zm00001d049956_P002	Maize	plastid	55.3	56.27
Os02t0436400-01	Rice	plastid	55.3	56.27
EER95181	Sorghum	mitochondrion	52.44	56.13
TraesCS1A01G102500.1	Wheat	plastid	54.73	56.01
TraesCS4B01G226100.1	Wheat	mitochondrion	52.15	55.83
TraesCS1D01G094400.1	Wheat	plastid	54.44	55.72
Zm00001d047935_P003	Maize	plasma membrane	51.29	54.41
HORVU4Hr1G063600.3	Barley	mitochondrion	50.43	51.61
HORVU1Hr1G021120.1	Barley	mitochondrion, plastid	54.73	47.28
KRH06535	Soybean	mitochondrion, plastid	18.62	42.76
TraesCS1B01G113300.2	Wheat	plastid	40.97	39.39
HORVU4Hr1G073970.1	Barley	cytosol	7.74	34.18

Protein Annotations

KEGG:00261+1.17.1.8	KEGG:00300+1.17.1.8	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:4.1.2.2.3.2	PDB:5UA0
EntrezGene:825159	UniProt:A0A178V6P3	ProteinID:AEE79981.1	ProteinID:AEE79982.1	ArrayExpress:AT3G59890	EnsemblPlantsGene:AT3G59890
RefSeq:AT3G59890	TAIR:AT3G59890	RefSeq:AT3G59890-TAIR-G	EnsemblPlants:AT3G59890.1	TAIR:AT3G59890.1	EMBL:AY087505
Unigene:At.34540	EMBL:BT026511	ProteinID:CAB75808.1	InterPro:DHDPR_bac	InterPro:DapB_C	InterPro:DapB_N
InterPro:Dihydrodipicolinate_Rdtase_pln	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0008839	GO:GO:0009058	GO:GO:0009085	GO:GO:0009089	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0016491	GO:GO:0019877	GO:GO:0055114	GO:GO:0070402
InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_567088.1	RefSeq:NP_974464.1	ProteinID:OAP01887.1	PFAM:PF01113	PFAM:PF05173
PO:PO:0000293	PANTHER:PTHR20836	PANTHER:PTHR20836:SF4	UniProt:Q8LB01	SUPFAM:SSF51735	TIGRFAMs:TIGR02130
UniParc:UPI00000A5F03	:	:	:	:	:

Description

DAPB24-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LB01]

Coordinates

chr3:-:22123982..22126630

Molecular Weight (calculated)

37871.7 Da

IEP (calculated)

7.306

GRAVY (calculated)

-0.013

Length

349 amino acids

Sequence
(BLAST)

001: MAANGLMAAS SVFLHRPVHP HFSFSSRTNQ MVPLGFKGRV SFIGNVKRCF PVVLSMGKSE TFEEAGNSVA PGNGISIMVN GCSGKMGKAV IKAADSAGVN
101: IVPTSFGSVE EAGQTVEVCG KEILVHGPTE REKVLSSVFE KYPELIVVDY TIPSAVNDNA ELYGKVGVPF VMGTTGGDRT RLYKTVEESK IYAVISPQMG
201: KQVVAFLAAM EIMSEQFPGA FAGYSLEVME SHQASKLDAS GTAKAVISCF QKLGVSYDMD QIQLIRDPKQ QIEVVGVPEE HVSGHAFHLY HLTSPDKTVS
301: FEFQHNVCGR SIYAEGTVDA VLFLAKKIRS KAEKRIYNMI DVLREGNMR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.