Factsheet for GSMUA_Achr1P02550_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06536	Soybean	cytosol	46.53	80.63
GSMUA_Achr4P25630_001	Banana	mitochondrion	67.07	75.0
Os03t0245100-01	Rice	mitochondrion	66.16	67.38
TraesCS1A01G102500.1	Wheat	plastid	66.77	64.81
TraesCS4B01G226100.1	Wheat	mitochondrion	63.75	64.72
Os02t0436400-01	Rice	plastid	67.07	64.72
TraesCS4A01G069000.2	Wheat	mitochondrion	63.75	64.53
TraesCS1D01G094400.1	Wheat	plastid	66.47	64.52
OQU80721	Sorghum	plastid	66.77	64.43
TraesCS4D01G226800.1	Wheat	mitochondrion	63.44	64.42
EER95181	Sorghum	mitochondrion	63.44	64.42
Zm00001d049956_P002	Maize	plastid	66.47	64.14
VIT_05s0094g01480.t01	Wine grape	mitochondrion, plastid	66.47	63.04
Zm00001d047935_P003	Maize	plasma membrane	62.24	62.61
PGSC0003DMT400073601	Potato	plastid	62.24	62.05
KRH47978	Soybean	mitochondrion	64.35	61.92
Solyc01g098380.2.1	Tomato	plastid	61.63	61.45
CDY30450	Canola	plastid	62.54	60.88
Bra037671.1-P	Field mustard	plastid	62.24	60.59
CDX83447	Canola	plastid	63.44	60.34
Bra000338.1-P	Field mustard	plastid	63.44	60.34
CDX95582	Canola	plastid	63.14	60.06
HORVU4Hr1G063600.3	Barley	mitochondrion	61.63	59.82
AT2G44040.1	Thale cress	plastid	62.54	59.65
AT3G59890.1	Thale cress	plastid	62.54	59.31
CDY23412	Canola	plastid	61.93	59.08
HORVU1Hr1G021120.1	Barley	mitochondrion, plastid	66.16	54.21
TraesCS1B01G113300.2	Wheat	plastid	49.85	45.45
HORVU4Hr1G073970.1	Barley	cytosol	10.57	44.3
KRH06535	Soybean	mitochondrion, plastid	17.82	38.82

Protein Annotations

KEGG:00261+1.17.1.8	KEGG:00300+1.17.1.8	Gene3D:3.30.360.10	Gene3D:3.40.50.720	MapMan:4.1.2.2.3.2	InterPro:DHDPR_bac
InterPro:DapB_C	InterPro:DapB_N	InterPro:Dihydrodipicolinate_Rdtase_pln	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008839	GO:GO:0009058	GO:GO:0009089
GO:GO:0009987	GO:GO:0055114	GO:GO:0070402	EnsemblPlantsGene:GSMUA_Achr1G02550_001	EnsemblPlants:GSMUA_Achr1P02550_001	EnsemblPlants:GSMUA_Achr1T02550_001
UniProt:M0RWG3	InterPro:NAD(P)-bd_dom_sf	PFAM:PF01113	PFAM:PF05173	PANTHER:PTHR20836	PANTHER:PTHR20836:SF3
SUPFAM:SSF51735	TIGRFAMs:TIGR02130	UniParc:UPI0002961DD9	SEG:seg	:	:

Description

Probable dihydrodipicolinate reductase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G02550_001]

Coordinates

chr1:-:2116377..2121231

Molecular Weight (calculated)

36143.8 Da

IEP (calculated)

8.225

GRAVY (calculated)

-0.076

Length

331 amino acids

Sequence
(BLAST)

001: MFSLLPQAAV SPLANRPPHR LFLAPRSPRR RSSVVVGALM SESPQKPADV STPNLCFPIL VNGCTGKMGK AVAETALSAG LQLVPVSFSS LEKPGRTLKV
101: GNTEIQIHGP SERESVLSSV SHEFPNVVVV DYTVPDAVNG NAELYCKLGL PFVMGTTGGD RHMLYKTVQD ANVYAVISPQ MGKQVVAFIA AMEIMADQFP
201: GAFSGYKLEV MESHQASKLD TSGTAKAVIS CFQKLGVSFD MKQIKQIRDP KKQLEMVGVP EEHLSGHAFH LYHLTSPDET VSFEFQHNVC GRSIYAEGSV
301: DAAVFLFKKV RSKAEQRIYD MIDVLREGNM R

Best Arabidopsis Sequence Match ( AT3G59890.2 )
(BLAST)

001: MAASSVFLHR PVHPHFSFSS RTNQMVPLGF KGRVSFIGNV KRCFPVVLSM GKSETFEEAG NSVAPGNGIS IMVNGCSGKM GKAVIKAADS AGVNIVPTSF
101: GSVEEAGQTV EVCGKEILVH GPTEREKVLS SVFEKYPELI VVDYTIPSAV NDNAELYGKV GVPFVMGTTG GDRTRLYKTV EESKIYAVIS PQMGKQVVAF
201: LAAMEIMSEQ FPGAFAGYSL EVMESHQASK LDASGTAKAV ISCFQKLGVS YDMDQIQLIR DPKQQIEVVG VPEEHVSGHA FHLYHLTSPD KTVSFEFQHN
301: VCGRSIYAEG TVDAVLFLAK KIRSKAEKRI YNMIDVLREG NMR

Arabidopsis Description

DAPB24-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LB01]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.