Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G481900.1 | Wheat | nucleus | 50.24 | 30.81 |
| TraesCS5A01G469100.2 | Wheat | nucleus | 48.82 | 29.86 |
| TraesCS5B01G481600.1 | Wheat | nucleus | 47.39 | 29.33 |
| HORVU5Hr1G111680.4 | Barley | plastid | 50.24 | 28.04 |
| EER90651 | Sorghum | nucleus, plastid | 34.12 | 21.18 |
| Zm00001d034607_P001 | Maize | plastid | 33.18 | 20.23 |
| GSMUA_Achr1P17210_001 | Banana | nucleus | 28.44 | 14.53 |
| PGSC0003DMT400030432 | Potato | nucleus | 27.96 | 13.95 |
| VIT_13s0067g03030.t01 | Wine grape | nucleus | 26.54 | 12.7 |
| Solyc05g052220.2.1 | Tomato | nucleus | 24.64 | 12.47 |
| CDY69157 | Canola | extracellular, golgi, vacuole | 16.59 | 11.71 |
| Bra000197.1-P | Field mustard | nucleus | 18.96 | 11.7 |
| CDY22467 | Canola | mitochondrion | 21.33 | 11.51 |
| KRH53725 | Soybean | nucleus | 23.22 | 11.45 |
| KRH64207 | Soybean | nucleus | 22.75 | 11.27 |
| AT2G40640.1 | Thale cress | mitochondrion | 17.06 | 9.4 |
| Os02t0829600-01 | Rice | plastid | 21.8 | 8.81 |
| Os07t0496900-02 | Rice | nucleus | 11.85 | 4.86 |
Protein Annotations
| EnsemblPlants:Os03t0816000-01 | EnsemblPlantsGene:Os03g0816000 | PANTHER:PTHR33644 | PANTHER:PTHR33644:SF3 | ProteinID:BAS87039.1 | SEG:seg |
| UniParc:UPI000393B92C | UniProt:A0A0P0W507 | MapMan:35.2 | : | : | : |
Description
plant U-box-containing protein 26, U-box protein 26Hypothetical conserved gene. (Os03t0816000-01)
Coordinates
chr3:-:34198879..34201889
Molecular Weight (calculated)
22595.8 Da
IEP (calculated)
4.443
GRAVY (calculated)
-0.723
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPPPGAHR AASSSGALAP AAFPAASHFA SRAAAPFLRQ QPHPGGGGDS DGDNAVEEVD EGDDDEDDEE EEAELADGAP CSSQQRCAST PGIGRAGMNR
101: GNGMRQIEEE QQWQHSHIYN CGNEQYGHAS SREDEPSTIP REMRVENGYG VIGRREGGPA SSYWDLLRAH LSDPLTGILM DDAMILSCGH SYGSNGMQHI
201: YRMVCQRILT V
101: GNGMRQIEEE QQWQHSHIYN CGNEQYGHAS SREDEPSTIP REMRVENGYG VIGRREGGPA SSYWDLLRAH LSDPLTGILM DDAMILSCGH SYGSNGMQHI
201: YRMVCQRILT V
001: MSHLRRRRFK LSLCALPVSI DRLLNFPAEK QMSVNDSIDP RFVFHVEDES LRFRVGDSGT KIRELETVGD RHFRTQQGFC GNRIEKDETM YSDGDDEEYD
101: VSIRRRTALI QPGIDSGNNY DSAAAEETNR ESKNPVGWEL VVREDGEGNS TIDRHEMEFK VRITKPDGNV SNSHRNTQQK RDFASVEKER VTTTSVSSWE
201: SLKAILSDPV TGALMNDATI LPCGHSFGAG GLKEVKKMKA CFTCSQPTLE GSEKPNLSLR IVVHAFRQEE DSDHIHTLKR RKERSDQVCF SNTQ
101: VSIRRRTALI QPGIDSGNNY DSAAAEETNR ESKNPVGWEL VVREDGEGNS TIDRHEMEFK VRITKPDGNV SNSHRNTQQK RDFASVEKER VTTTSVSSWE
201: SLKAILSDPV TGALMNDATI LPCGHSFGAG GLKEVKKMKA CFTCSQPTLE GSEKPNLSLR IVVHAFRQEE DSDHIHTLKR RKERSDQVCF SNTQ
Arabidopsis Description
PUB63U-box domain-containing protein 63 [Source:UniProtKB/Swiss-Prot;Acc:Q58FY4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.