Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90651 | Sorghum | nucleus, plastid | 78.9 | 80.29 |
| TraesCS5B01G481600.1 | Wheat | nucleus | 50.58 | 51.32 |
| TraesCS5D01G481900.1 | Wheat | nucleus | 50.58 | 50.87 |
| TraesCS5A01G469100.2 | Wheat | nucleus | 48.55 | 48.7 |
| HORVU5Hr1G111680.4 | Barley | plastid | 50.58 | 46.3 |
| GSMUA_Achr1P17210_001 | Banana | nucleus | 39.88 | 33.41 |
| Os03t0816000-01 | Rice | plastid | 20.23 | 33.18 |
| Solyc05g052220.2.1 | Tomato | nucleus | 38.73 | 32.13 |
| PGSC0003DMT400030432 | Potato | nucleus | 38.73 | 31.68 |
| VIT_13s0067g03030.t01 | Wine grape | nucleus | 40.17 | 31.52 |
| KRH64207 | Soybean | nucleus | 38.44 | 31.22 |
| Bra000197.1-P | Field mustard | nucleus | 30.64 | 30.99 |
| KRH53725 | Soybean | nucleus | 37.86 | 30.61 |
| AT2G40640.1 | Thale cress | mitochondrion | 30.64 | 27.68 |
| CDY22467 | Canola | mitochondrion | 30.35 | 26.85 |
| Zm00001d018533_P003 | Maize | plastid | 29.19 | 19.31 |
| CDY69157 | Canola | extracellular, golgi, vacuole | 10.12 | 11.71 |
| Zm00001d006430_P001 | Maize | cytosol | 10.98 | 7.34 |
| Zm00001d021542_P001 | Maize | cytosol | 4.62 | 6.04 |
Protein Annotations
| EMBL:BT087297 | EnsemblPlants:Zm00001d034607_P001 | EnsemblPlants:Zm00001d034607_T001 | EnsemblPlantsGene:Zm00001d034607 | EntrezGene:100276216 | Gene3D:3.30.40.10 |
| InterPro:IPR013083 | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR33644 | PANTHER:PTHR33644:SF3 | ProteinID:ONM10756.1 |
| SEG:seg | SUPFAM:SSF57850 | UniParc:UPI0001A4C4E9 | UniProt:C4J900 | MapMan:35.1 | : |
Description
U-box domain-containing protein 62
Coordinates
chr1:-:297658231..297671149
Molecular Weight (calculated)
37048.3 Da
IEP (calculated)
6.602
GRAVY (calculated)
-0.570
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPAGANSG ASSSRGTPLP LPFPFPAAAH FPSRGAGPFL SQHYHPPSTS DGDDEVEEDE GSMDDGSAEE DDAELSDGGA LGSPRRRAFS APGIGRMEIN
101: GGNGVRSIQE GQQWHLCNHG IEIGRPSPGG DEPGTIPRDV RVENGHGVVG RRDGGPASSY WDLLRAHLSD PLTGVLMDDA LILSCGHSYG SSGMQHVYRM
201: KACGKCGMPI TEAAIRPNLA LRLAVQAFKR EEDSAKSLKR RRERLELDKC GDDDPNRTEL ATRGKGVQFP FSVFDRVIIK GNKRTPERFV GRQAVVTAQC
301: LNGWYVVKTS DNAESVKLQY RSLAKVADGN GPSGLVPSNV QSTSWL
101: GGNGVRSIQE GQQWHLCNHG IEIGRPSPGG DEPGTIPRDV RVENGHGVVG RRDGGPASSY WDLLRAHLSD PLTGVLMDDA LILSCGHSYG SSGMQHVYRM
201: KACGKCGMPI TEAAIRPNLA LRLAVQAFKR EEDSAKSLKR RRERLELDKC GDDDPNRTEL ATRGKGVQFP FSVFDRVIIK GNKRTPERFV GRQAVVTAQC
301: LNGWYVVKTS DNAESVKLQY RSLAKVADGN GPSGLVPSNV QSTSWL
001: MSGKGLSPAP FNAQPMIVQD ADPLRFRVGE QDPKTREFAA FIGDHRYFAA AAAAAAAANP HPHLEFRQNF YSEKPIIGNP NDSGGSDGED DVDVEEEDED
101: DDLDGNEGDI GMNKDAGEDS VSAGAVIVVG QDNAAYYSQH FKTVEASFVS RNEESSIAAD NGCDFSGRRD LSSSSSNSIE SLRTILSDPT TGSLMADAMI
201: LPCGHTFGAG GIEQVKQMKA CCTCSQPVSE DSITPNLTLR VAVQAFCREE NSQSNHPSKR KREGFDQERR AFGVTNHSGR SRNKSNHFPF AVADRVIIKG
301: NKRTPPRFVG REAVVTTQCL NGWYVVKTLD NAESVKLQYR SLAKAPEDPS AKATPNKMVS NWL
101: DDLDGNEGDI GMNKDAGEDS VSAGAVIVVG QDNAAYYSQH FKTVEASFVS RNEESSIAAD NGCDFSGRRD LSSSSSNSIE SLRTILSDPT TGSLMADAMI
201: LPCGHTFGAG GIEQVKQMKA CCTCSQPVSE DSITPNLTLR VAVQAFCREE NSQSNHPSKR KREGFDQERR AFGVTNHSGR SRNKSNHFPF AVADRVIIKG
301: NKRTPPRFVG REAVVTTQCL NGWYVVKTLD NAESVKLQYR SLAKAPEDPS AKATPNKMVS NWL
Arabidopsis Description
PUB62U-box domain-containing protein 62 [Source:UniProtKB/Swiss-Prot;Acc:Q6DBN5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.