Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013483 | Potato | plastid | 99.16 | 99.16 |
| Solyc06g048480.2.1 | Tomato | nucleus | 92.26 | 91.88 |
| KRH72561 | Soybean | nucleus | 88.91 | 88.54 |
| KRH16944 | Soybean | plastid | 87.24 | 87.06 |
| KRH53685 | Soybean | nucleus, plastid | 86.61 | 86.61 |
| KRH64247 | Soybean | nucleus, plastid | 86.4 | 86.04 |
| Os05t0482600-01 | Rice | plastid | 80.75 | 84.84 |
| EES18406 | Sorghum | plastid | 79.5 | 83.33 |
| VIT_13s0067g00100.t01 | Wine grape | plastid | 84.52 | 82.96 |
| TraesCS1D01G302800.1 | Wheat | mitochondrion, plastid | 77.2 | 81.1 |
| TraesCS1A01G303300.1 | Wheat | mitochondrion, plastid | 77.2 | 81.1 |
| Zm00001d038513_P002 | Maize | plastid | 77.62 | 81.0 |
| TraesCS1B01G313700.1 | Wheat | plastid | 76.36 | 80.22 |
| HORVU1Hr1G069210.3 | Barley | nucleus, plastid | 76.36 | 80.22 |
| Zm00001d010625_P003 | Maize | plastid | 78.87 | 77.41 |
| Os01t0817800-01 | Rice | plastid | 72.8 | 76.65 |
| TraesCS3D01G334700.1 | Wheat | nucleus, plastid | 70.71 | 75.28 |
| TraesCS3A01G341100.1 | Wheat | nucleus, plastid | 70.5 | 75.06 |
| HORVU3Hr1G080560.3 | Barley | nucleus, plastid | 70.29 | 74.83 |
| KRH53714 | Soybean | cytosol | 40.17 | 74.42 |
| TraesCS3B01G373200.1 | Wheat | nucleus | 63.6 | 67.56 |
Protein Annotations
| EnsemblPlants:Solyc03g095260.2.1 | EnsemblPlantsGene:Solyc03g095260.2 | PANTHER:PTHR31789 | SUPFAM:SSF69322 | UniParc:UPI0002767835 | UniProt:K4BIV1 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:56240250..56246855
Molecular Weight (calculated)
54395.7 Da
IEP (calculated)
8.454
GRAVY (calculated)
-0.380
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGRRISASP RPCCGRRVVA KKRSRGGVDG FVNSVKKLQR REICSKRDRS FSMSDAQERF RNIRLQEEYD THDPKGHCAM VLPFLKKRSK IIEIVAARDI
101: VFALAQSGVC AAFSRETNER ICFLNISPDE VIRSLFYNKN NDSLITVSVY ASDNFSSLKC RTTRIEYIRR GKPDAGFALF ESESLKWPGF VEFDDVNGKV
201: LTYSAQDSIY KVFDLKNYTM LYSISDKNVQ EIKISPGIML LIFTKASGHV PLKILSIEDG TVLKSFNHLL HRNKKVDFIE QFNEKLLVKQ ENENLQILDV
301: RNSELTEVSR TEFMTPSAFI FLYENQLFLT FRNRTVAVWN FRGELVTSFE DHLLWHPDCN TNNIYITSDQ DLIISYCKAD SDDPLSEGNA GSINISNILS
401: GKCLAKIKAT SGKATDDCNA SSSVPGKKSY NSNKRVQDSR IRSTVAEALE DITALFYDEE RNEIYTGNRL GLVHVWSN
101: VFALAQSGVC AAFSRETNER ICFLNISPDE VIRSLFYNKN NDSLITVSVY ASDNFSSLKC RTTRIEYIRR GKPDAGFALF ESESLKWPGF VEFDDVNGKV
201: LTYSAQDSIY KVFDLKNYTM LYSISDKNVQ EIKISPGIML LIFTKASGHV PLKILSIEDG TVLKSFNHLL HRNKKVDFIE QFNEKLLVKQ ENENLQILDV
301: RNSELTEVSR TEFMTPSAFI FLYENQLFLT FRNRTVAVWN FRGELVTSFE DHLLWHPDCN TNNIYITSDQ DLIISYCKAD SDDPLSEGNA GSINISNILS
401: GKCLAKIKAT SGKATDDCNA SSSVPGKKSY NSNKRVQDSR IRSTVAEALE DITALFYDEE RNEIYTGNRL GLVHVWSN
001: MEGRRITASP RPCSGRRIVA KKRSRPDGFV NSVKKLQRRE ISSRKDRAFS ISTAQERFRN MRLVEQYDTH DPKGHCLVAL PFLMKRTKVI EIVAARDIVF
101: ALAHSGVCAA FSRESNKRIC FLNVSPDEVI RSLFYNKNND SLITVSVYAS DNFSSLKCRS TRIEYILRGQ PDAGFALFES ESLKWPGFVE FDDVNGKVLT
201: YSAQDSVYKV FDLKNYTMLY SISDKNVQEI KISPGIMLLI FKRAASHVPL KILSIEDGTV LKSFNHLLHR NKKVDFIEQF NEKLLVKQEN ENLQILDVRN
301: AELMEVSRAE FMTPSAFIFL YENQLFLTFR NRNVSVWNFR GELVTSFEDH LLWHPDCNTN NIYITSDQDL IISYCKADTE DQWIEGNAGS INISNILTGK
401: CLAKITPSSG PPKDDESSSS NCMGKNSKQR RNAVAEALED ITALFYDEER NEIYTGNRHG LVHVWSN
101: ALAHSGVCAA FSRESNKRIC FLNVSPDEVI RSLFYNKNND SLITVSVYAS DNFSSLKCRS TRIEYILRGQ PDAGFALFES ESLKWPGFVE FDDVNGKVLT
201: YSAQDSVYKV FDLKNYTMLY SISDKNVQEI KISPGIMLLI FKRAASHVPL KILSIEDGTV LKSFNHLLHR NKKVDFIEQF NEKLLVKQEN ENLQILDVRN
301: AELMEVSRAE FMTPSAFIFL YENQLFLTFR NRNVSVWNFR GELVTSFEDH LLWHPDCNTN NIYITSDQDL IISYCKADTE DQWIEGNAGS INISNILTGK
401: CLAKITPSSG PPKDDESSSS NCMGKNSKQR RNAVAEALED ITALFYDEER NEIYTGNRHG LVHVWSN
Arabidopsis Description
AT3g54190/F24B22_150 [Source:UniProtKB/TrEMBL;Acc:Q9C5G8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.