CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72561	Soybean	nucleus	97.7	97.5
KRH53685	Soybean	nucleus, plastid	91.02	91.21
KRH64247	Soybean	nucleus, plastid	91.23	91.04
Solyc03g095260.2.1	Tomato	plastid	87.06	87.24
PGSC0003DMT400013483	Potato	plastid	87.06	87.24
Solyc06g048480.2.1	Tomato	nucleus	85.59	85.42
Os05t0482600-01	Rice	plastid	79.12	83.3
EES18406	Sorghum	plastid	77.87	81.8
VIT_13s0067g00100.t01	Wine grape	plastid	81.63	80.29
TraesCS1D01G302800.1	Wheat	mitochondrion, plastid	74.95	78.9
TraesCS1A01G303300.1	Wheat	mitochondrion, plastid	74.95	78.9
Zm00001d038513_P002	Maize	plastid	75.37	78.82
TraesCS1B01G313700.1	Wheat	plastid	74.53	78.46
KRH53714	Soybean	cytosol	42.17	78.29
HORVU1Hr1G069210.3	Barley	nucleus, plastid	74.32	78.24
Zm00001d010625_P003	Maize	plastid	77.04	75.77
Os01t0817800-01	Rice	plastid	69.73	73.57
KRH40628	Soybean	plastid	73.07	72.77
TraesCS3D01G334700.1	Wheat	nucleus, plastid	68.06	72.61
KRH00534	Soybean	plastid	72.44	72.44
TraesCS3A01G341100.1	Wheat	nucleus, plastid	67.85	72.38
HORVU3Hr1G080560.3	Barley	nucleus, plastid	67.64	72.16
TraesCS3B01G373200.1	Wheat	nucleus	61.59	65.56
KRH40627	Soybean	extracellular, plasma membrane	33.61	61.22

Protein Annotations

EMBL:ACUP02009033	EnsemblPlants:KRH16944	EnsemblPlantsGene:GLYMA_14G187400	EntrezGene:100819178	Gene3D:2.130.10.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR015943	InterPro:WD40/YVTN_repeat-like_dom_sf	PANTHER:PTHR31789	ProteinID:KRH16944
ProteinID:KRH16944.1	SEG:seg	SUPFAM:SSF69322	UniParc:UPI000233B12C	UniProt:I1MB48	MapMan:35.2

Description

hypothetical protein

Coordinates

chr14:-:45209096..45212965

Molecular Weight (calculated)

54562.7 Da

IEP (calculated)

7.838

GRAVY (calculated)

-0.345

Length

479 amino acids

Sequence
(BLAST)

001: MEGGGRRITV SPRPCCGRRV VAKKRPRLVD GFVNSVKKLQ RREISSNRDR AFSMTDAQER FRNIRLQEEY DTHDPKGPSS VVLSFLRKRS KIIEIVAARD
101: IVFALAQSGV CAAFSRETNE RICFLNVSPD EVIRSLFYNK NNDSLITVSV YASDSYSSLK CRSTRIEYIR RVKPDAGFAL FESESLKWPG FVEFDDVNGK
201: VLTYSAQDSI YKVFDLKNYS MLYSISDKNV QEIKISPGIM LLIFAKSSSH VPLKILSIED GTVLKSFNHL LHRNKKVDFI EQFNEKLLVK QENENLQILD
301: VRTFELTEVS RSEFMTPSAF IFLYENQLFL TFRNQTVAVW NFRGELVTSF EDHLLWHPDC NTNNIYITSD QDLIISYCKA DSDDSLSEGN GSINVSNILT
401: GKCLAKIRAS NGFPMVKECS CSDDNCSSSA CNSGKQKHSS RIRSTVAEAL EDITALFYDE ERNEIYTGNR HGLVHVWSN

Best Arabidopsis Sequence Match ( AT3G54190.1 )
(BLAST)

001: MEGRRITASP RPCSGRRIVA KKRSRPDGFV NSVKKLQRRE ISSRKDRAFS ISTAQERFRN MRLVEQYDTH DPKGHCLVAL PFLMKRTKVI EIVAARDIVF
101: ALAHSGVCAA FSRESNKRIC FLNVSPDEVI RSLFYNKNND SLITVSVYAS DNFSSLKCRS TRIEYILRGQ PDAGFALFES ESLKWPGFVE FDDVNGKVLT
201: YSAQDSVYKV FDLKNYTMLY SISDKNVQEI KISPGIMLLI FKRAASHVPL KILSIEDGTV LKSFNHLLHR NKKVDFIEQF NEKLLVKQEN ENLQILDVRN
301: AELMEVSRAE FMTPSAFIFL YENQLFLTFR NRNVSVWNFR GELVTSFEDH LLWHPDCNTN NIYITSDQDL IISYCKADTE DQWIEGNAGS INISNILTGK
401: CLAKITPSSG PPKDDESSSS NCMGKNSKQR RNAVAEALED ITALFYDEER NEIYTGNRHG LVHVWSN

Arabidopsis Description

AT3g54190/F24B22_150 [Source:UniProtKB/TrEMBL;Acc:Q9C5G8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.