Factsheet for HORVU1Hr1G069210.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G020140.3
HORVU2Hr1G057140.1
HORVU2Hr1G057150.1
HORVU4Hr1G075310.1
HORVU5Hr1G038090.3
HORVU6Hr1G075590.1
HORVU7Hr1G000010.5
HORVU7Hr1G000070.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54190.1	HORVU2Hr1G057140.1	AT1G14330.1	21798944
AT3G54190.1	HORVU2Hr1G057150.1	AT1G14330.1	21798944
AT3G54190.1	HORVU4Hr1G075310.1	AT1G14330.1	21798944
AT3G54190.1	HORVU6Hr1G075590.1	AT1G14330.1	21798944
AT3G54190.1	HORVU7Hr1G000010.5	AT1G14330.1	21798944
AT3G54190.1	HORVU7Hr1G000070.1	AT1G14330.1	21798944
AT3G54190.1	HORVU2Hr1G020140.3	AT1G25550.1	21798944
AT3G54190.1	HORVU5Hr1G038090.3	AT1G34430.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G302800.1	Wheat	mitochondrion, plastid	96.26	96.26
TraesCS1B01G313700.1	Wheat	plastid	96.26	96.26
TraesCS1A01G303300.1	Wheat	mitochondrion, plastid	96.26	96.26
EES18406	Sorghum	plastid	90.55	90.35
Os05t0482600-01	Rice	plastid	89.67	89.67
Zm00001d038513_P002	Maize	plastid	88.13	87.55
Zm00001d010625_P003	Maize	plastid	90.11	84.19
HORVU3Hr1G080560.3	Barley	nucleus, plastid	77.8	78.84
CDX73499	Canola	plastid	77.14	77.65
CDX78216	Canola	plastid	77.14	77.65
PGSC0003DMT400013483	Potato	plastid	80.44	76.57
Solyc03g095260.2.1	Tomato	plastid	80.22	76.36
CDX76163	Canola	plastid	75.82	75.82
AT3G54190.1	Thale cress	plastid	77.14	75.16
Solyc06g048480.2.1	Tomato	nucleus	79.12	75.0
VIT_08s0056g00230.t01	Wine grape	plastid	76.48	75.0
CDY13190	Canola	plastid	76.7	74.73
KRH53685	Soybean	nucleus, plastid	78.46	74.69
KRH72561	Soybean	nucleus	78.68	74.58
KRH16944	Soybean	plastid	78.24	74.32
Bra007053.1-P	Field mustard	plastid	76.48	74.2
KRH64247	Soybean	nucleus, plastid	78.24	74.17
AT2G38630.1	Thale cress	plastid	75.82	73.88
Bra014834.1-P	Field mustard	plastid	76.04	73.46
VIT_13s0067g00100.t01	Wine grape	plastid	75.16	70.23
HORVU5Hr1G035370.20	Barley	cytosol	63.08	67.21
KRH00534	Soybean	plastid	70.55	67.01
KRH40628	Soybean	plastid	70.77	66.94
KRH53714	Soybean	cytosol	36.26	63.95
HORVU6Hr1G082150.2	Barley	mitochondrion	65.05	60.91
KRH40627	Soybean	extracellular, plasma membrane	31.21	53.99

Protein Annotations

EMBL:AK356652	EnsemblPlants:HORVU1Hr1G069210.3	EnsemblPlantsGene:HORVU1Hr1G069210	PANTHER:PTHR31789	SEG:seg	SUPFAM:SSF69322
UniParc:UPI0002004D31	UniProt:F2CYE8	MapMan:35.2	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CYE8]

Coordinates

chrchr1H:-:483521304..483525244

Molecular Weight (calculated)

52462.4 Da

IEP (calculated)

8.526

GRAVY (calculated)

-0.378

Length

455 amino acids

Sequence
(BLAST)

001: MEARRISASP RPCNGRRVVA RKRPRQEAVV SSVRKLQRRE ISSRRERSFA MNSAQERFRN IQLQEEFDTH DPKENNALLP YIRKRSKIIE IVAARDIIFA
101: LSQSGVCAAF SRVMNKRICF LNGSPDEVVR SLFYNKNNDS LITVSVYGSE NFSALRCKTT RIEYIRRGTP DAGFPLFETE SLKWPGFVEF DDVNGKVLTY
201: SAQDSTYKVF DLKNYTLLYS ICDKNVQEIK ISPGIMLLIY TRTSSSIPLK ILSIEDGTVL KFFNHLLHRN KKVDFIEQFN EKLLVKQDGE NLQILDVRNF
301: HLTEVSSTEF MTPSAFIFLY ELQLFLTFRN RSVAVWNFRG ELVTSFEDHL LWHPDCNTNN IYITSDQDII ISYCKADSSD SSSEENAGSI NISNILTGKC
401: LAKIKAGNFD KQQKTWKFQN TITEALEDIT ALHYDEVRDE IYTGNRHGLV HVWAN

Best Arabidopsis Sequence Match ( AT3G54190.1 )
(BLAST)

001: MEGRRITASP RPCSGRRIVA KKRSRPDGFV NSVKKLQRRE ISSRKDRAFS ISTAQERFRN MRLVEQYDTH DPKGHCLVAL PFLMKRTKVI EIVAARDIVF
101: ALAHSGVCAA FSRESNKRIC FLNVSPDEVI RSLFYNKNND SLITVSVYAS DNFSSLKCRS TRIEYILRGQ PDAGFALFES ESLKWPGFVE FDDVNGKVLT
201: YSAQDSVYKV FDLKNYTMLY SISDKNVQEI KISPGIMLLI FKRAASHVPL KILSIEDGTV LKSFNHLLHR NKKVDFIEQF NEKLLVKQEN ENLQILDVRN
301: AELMEVSRAE FMTPSAFIFL YENQLFLTFR NRNVSVWNFR GELVTSFEDH LLWHPDCNTN NIYITSDQDL IISYCKADTE DQWIEGNAGS INISNILTGK
401: CLAKITPSSG PPKDDESSSS NCMGKNSKQR RNAVAEALED ITALFYDEER NEIYTGNRHG LVHVWSN

Arabidopsis Description

AT3g54190/F24B22_150 [Source:UniProtKB/TrEMBL;Acc:Q9C5G8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.