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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:mitochondrion, nucleus, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G116100.2
TraesCS2B01G135600.1
TraesCS2D01G119100.1
TraesCS4A01G016200.1
TraesCS4A01G487800.1
TraesCS4A01G489300.1
TraesCS4A01G489600.1
TraesCS4A01G491100.1
TraesCS4A01G492300.1
TraesCS4A01G493200.1
TraesCS4A01G493800.1
TraesCS4D01G286700.1
TraesCS5A01G119600.1
TraesCS5B01G116300.1
TraesCS5D01G125900.1
TraesCS5D01G126000.1
TraesCS6A01G306000.1
TraesCS6B01G334300.1
TraesCS6D01G285100.1
TraesCS7A01G004600.1
TraesCS7D01G005100.1
TraesCS7D01G007100.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G54190.1 TraesCS4A01G016200.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS4A01G487800.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS4A01G489300.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS4A01G489600.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS4A01G491100.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS4A01G492300.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS4A01G493200.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS4A01G493800.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS4D01G286700.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS6A01G306000.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS6B01G334300.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS6D01G285100.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS7A01G004600.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS7D01G005100.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS7D01G007100.1 AT1G14330.1 21798944
AT3G54190.1 TraesCS2A01G116100.2 AT1G25550.1 21798944
AT3G54190.1 TraesCS2B01G135600.1 AT1G25550.1 21798944
AT3G54190.1 TraesCS2D01G119100.1 AT1G25550.1 21798944
AT3G54190.1 TraesCS5A01G119600.1 AT1G34430.1 21798944
AT3G54190.1 TraesCS5B01G116300.1 AT1G34430.1 21798944
AT3G54190.1 TraesCS5D01G125900.1 AT1G34430.1 21798944
AT3G54190.1 TraesCS5D01G126000.1 AT1G34430.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G302800.1 Wheat mitochondrion, plastid 100.0 100.0
TraesCS1B01G313700.1 Wheat plastid 98.68 98.68
HORVU1Hr1G069210.3 Barley nucleus, plastid 96.26 96.26
EES18406 Sorghum plastid 92.09 91.89
Os05t0482600-01 Rice plastid 91.21 91.21
Zm00001d038513_P002 Maize plastid 88.79 88.21
Zm00001d010625_P003 Maize plastid 90.11 84.19
TraesCS3A01G341100.1 Wheat nucleus, plastid 78.68 79.73
CDX73499 Canola plastid 78.02 78.54
CDX78216 Canola plastid 78.02 78.54
PGSC0003DMT400013483 Potato plastid 81.32 77.41
Solyc03g095260.2.1 Tomato plastid 81.1 77.2
CDX76163 Canola plastid 76.48 76.48
VIT_08s0056g00230.t01 Wine grape plastid 77.36 75.86
AT3G54190.1 Thale cress plastid 77.8 75.8
KRH53685 Soybean nucleus, plastid 79.34 75.52
KRH72561 Soybean nucleus 79.56 75.42
CDY13190 Canola plastid 77.36 75.37
Solyc06g048480.2.1 Tomato nucleus 79.34 75.21
Bra007053.1-P Field mustard plastid 77.36 75.05
KRH16944 Soybean plastid 78.9 74.95
KRH64247 Soybean nucleus, plastid 78.9 74.79
AT2G38630.1 Thale cress plastid 76.7 74.73
Bra014834.1-P Field mustard plastid 76.7 74.1
VIT_13s0067g00100.t01 Wine grape plastid 76.04 71.05
KRH00534 Soybean plastid 70.99 67.43
KRH40628 Soybean plastid 71.21 67.36
KRH53714 Soybean cytosol 36.7 64.73
TraesCS5A01G107600.1 Wheat mitochondrion 68.35 64.52
KRH40627 Soybean extracellular, plasma membrane 31.65 54.75
Protein Annotations
EnsemblPlants:TraesCS1A01G303300.1EnsemblPlantsGene:TraesCS1A01G303300PANTHER:PTHR31789SEG:segSUPFAM:SSF69322MapMan:35.2
Description
No Description!
Coordinates
chr1A:+:497073073..497076500
Molecular Weight (calculated)
52518.4 Da
IEP (calculated)
8.435
GRAVY (calculated)
-0.412
Length
455 amino acids
Sequence
(BLAST)
001: MEARRISATP RPCNGRRVVA RKRPRQEAVI SSVRKLQRRE ISSRRERSFA MNSAQERFRN IQLQEEFDTH DPKENNALLP YIRKRSKIIE IVAARDIVFA
101: LSQSGVCAAF SRVTNKRICF LNGSPDEVVR SLFYNKNNDS LITVSVYGSE NFSALRCKTT RIEYIRRGTP DAGFPLFETE SLKWPGFVEF DDVNGKVLTY
201: SAQDSTYKVF DLKNYTLLYS ISDKNVQEIK ISPGIMLLIY TRTSSSIPLK ILNIEDGTVL KFFNHLLHRN KKVDFIEQFN EKLLVKQDGE NLQILDVRNF
301: QLTEVSSTEF MTPSAFIFLY ELQLFLTFRN RSVAVWNFRG ELVTSFEDHL LWHPDCNTNN IYITSDQDLI ISYCKADSTD SSSEENAGSI NISNILTGKC
401: LAKIKAGNFN EQKKTWKFQN TITEALEDIT ALYYDEERDE IYTGNRHGLV HVWAN
Best Arabidopsis Sequence Match ( AT3G54190.1 )
(BLAST)
001: MEGRRITASP RPCSGRRIVA KKRSRPDGFV NSVKKLQRRE ISSRKDRAFS ISTAQERFRN MRLVEQYDTH DPKGHCLVAL PFLMKRTKVI EIVAARDIVF
101: ALAHSGVCAA FSRESNKRIC FLNVSPDEVI RSLFYNKNND SLITVSVYAS DNFSSLKCRS TRIEYILRGQ PDAGFALFES ESLKWPGFVE FDDVNGKVLT
201: YSAQDSVYKV FDLKNYTMLY SISDKNVQEI KISPGIMLLI FKRAASHVPL KILSIEDGTV LKSFNHLLHR NKKVDFIEQF NEKLLVKQEN ENLQILDVRN
301: AELMEVSRAE FMTPSAFIFL YENQLFLTFR NRNVSVWNFR GELVTSFEDH LLWHPDCNTN NIYITSDQDL IISYCKADTE DQWIEGNAGS INISNILTGK
401: CLAKITPSSG PPKDDESSSS NCMGKNSKQR RNAVAEALED ITALFYDEER NEIYTGNRHG LVHVWSN
Arabidopsis Description
AT3g54190/F24B22_150 [Source:UniProtKB/TrEMBL;Acc:Q9C5G8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.