Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g095260.2.1 | Tomato | plastid | 91.88 | 92.26 |
| KRH72561 | Soybean | nucleus | 86.67 | 86.67 |
| KRH53685 | Soybean | nucleus, plastid | 85.83 | 86.19 |
| KRH16944 | Soybean | plastid | 85.42 | 85.59 |
| KRH64247 | Soybean | nucleus, plastid | 85.42 | 85.42 |
| Os05t0482600-01 | Rice | plastid | 79.38 | 83.74 |
| EES18406 | Sorghum | plastid | 77.92 | 82.02 |
| VIT_13s0067g00100.t01 | Wine grape | plastid | 82.71 | 81.52 |
| Zm00001d038513_P002 | Maize | plastid | 76.25 | 79.91 |
| TraesCS1A01G303300.1 | Wheat | mitochondrion, plastid | 75.21 | 79.34 |
| TraesCS1D01G302800.1 | Wheat | mitochondrion, plastid | 75.21 | 79.34 |
| HORVU1Hr1G069210.3 | Barley | nucleus, plastid | 75.0 | 79.12 |
| TraesCS1B01G313700.1 | Wheat | plastid | 74.79 | 78.9 |
| Zm00001d010625_P003 | Maize | plastid | 77.5 | 76.39 |
| Os01t0817800-01 | Rice | plastid | 71.46 | 75.55 |
| TraesCS3D01G334700.1 | Wheat | nucleus, plastid | 70.21 | 75.06 |
| TraesCS3A01G341100.1 | Wheat | nucleus, plastid | 70.0 | 74.83 |
| HORVU3Hr1G080560.3 | Barley | nucleus, plastid | 69.79 | 74.61 |
| KRH53714 | Soybean | cytosol | 38.96 | 72.48 |
| TraesCS3B01G373200.1 | Wheat | nucleus | 62.92 | 67.11 |
Protein Annotations
| EnsemblPlants:Solyc06g048480.2.1 | EnsemblPlantsGene:Solyc06g048480.2 | PANTHER:PTHR31789 | SUPFAM:SSF69322 | UniParc:UPI000276654A | UniProt:K4C595 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:-:31121878..31130596
Molecular Weight (calculated)
54685.1 Da
IEP (calculated)
8.467
GRAVY (calculated)
-0.391
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGRRITASP RPCCGRRVVA KKRPRGGMDG FVNSVKKLQR REIGSKRDRS FSMSDAQERF RNIHLQEEYD THDPKGHCAM VLPFLKKRSK IIEIVAARDI
101: VFALAQSGVC AAFSRESNRR ICFLNVSPDE VIRSLFYNKN NDSLITVSVY ASDNFSSLKC RTTRIEYLRR GKPDAGFALF ESESLKWPGF VEFDDVNGKV
201: LTYSAQDSIY KVFDLKNYTM LYSISDKNVQ EIKISPGIML LIFTKASGHV PLKILSIEDG TVLKSFNHLL HRNKKVDFIE QFNEKLLVKQ ENENLQILDV
301: RNSELTEVSR AEFMTPSAFI FLYENQLFLT FRNRTVAVWN FRGELVTSFE DHLLWHPDCN TNNIYITSDQ DLIISYCKAD SDDPLSEATA GSINISNILT
401: GKCLAKIKAT ERRRSDDCSC STNCNGHGGR SCNAKKRIQA SRTRSTVAEA LEDITALFYD EEHNEIYTGN SFGLIHVWSN
101: VFALAQSGVC AAFSRESNRR ICFLNVSPDE VIRSLFYNKN NDSLITVSVY ASDNFSSLKC RTTRIEYLRR GKPDAGFALF ESESLKWPGF VEFDDVNGKV
201: LTYSAQDSIY KVFDLKNYTM LYSISDKNVQ EIKISPGIML LIFTKASGHV PLKILSIEDG TVLKSFNHLL HRNKKVDFIE QFNEKLLVKQ ENENLQILDV
301: RNSELTEVSR AEFMTPSAFI FLYENQLFLT FRNRTVAVWN FRGELVTSFE DHLLWHPDCN TNNIYITSDQ DLIISYCKAD SDDPLSEATA GSINISNILT
401: GKCLAKIKAT ERRRSDDCSC STNCNGHGGR SCNAKKRIQA SRTRSTVAEA LEDITALFYD EEHNEIYTGN SFGLIHVWSN
001: MEGRRITASP RPCSGRRIVA KKRSRPDGFV NSVKKLQRRE ISSRKDRAFS ISTAQERFRN MRLVEQYDTH DPKGHCLVAL PFLMKRTKVI EIVAARDIVF
101: ALAHSGVCAA FSRESNKRIC FLNVSPDEVI RSLFYNKNND SLITVSVYAS DNFSSLKCRS TRIEYILRGQ PDAGFALFES ESLKWPGFVE FDDVNGKVLT
201: YSAQDSVYKV FDLKNYTMLY SISDKNVQEI KISPGIMLLI FKRAASHVPL KILSIEDGTV LKSFNHLLHR NKKVDFIEQF NEKLLVKQEN ENLQILDVRN
301: AELMEVSRAE FMTPSAFIFL YENQLFLTFR NRNVSVWNFR GELVTSFEDH LLWHPDCNTN NIYITSDQDL IISYCKADTE DQWIEGNAGS INISNILTGK
401: CLAKITPSSG PPKDDESSSS NCMGKNSKQR RNAVAEALED ITALFYDEER NEIYTGNRHG LVHVWSN
101: ALAHSGVCAA FSRESNKRIC FLNVSPDEVI RSLFYNKNND SLITVSVYAS DNFSSLKCRS TRIEYILRGQ PDAGFALFES ESLKWPGFVE FDDVNGKVLT
201: YSAQDSVYKV FDLKNYTMLY SISDKNVQEI KISPGIMLLI FKRAASHVPL KILSIEDGTV LKSFNHLLHR NKKVDFIEQF NEKLLVKQEN ENLQILDVRN
301: AELMEVSRAE FMTPSAFIFL YENQLFLTFR NRNVSVWNFR GELVTSFEDH LLWHPDCNTN NIYITSDQDL IISYCKADTE DQWIEGNAGS INISNILTGK
401: CLAKITPSSG PPKDDESSSS NCMGKNSKQR RNAVAEALED ITALFYDEER NEIYTGNRHG LVHVWSN
Arabidopsis Description
AT3g54190/F24B22_150 [Source:UniProtKB/TrEMBL;Acc:Q9C5G8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.