Factsheet for TraesCS4B01G088300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G085400.1	Wheat	mitochondrion	96.71	96.71
TraesCS4A01G227800.1	Wheat	mitochondrion	95.7	95.7
HORVU4Hr1G015050.1	Barley	mitochondrion	94.43	94.43
Zm00001d007272_P001	Maize	mitochondrion	70.89	70.89
Zm00001d049002_P001	Maize	mitochondrion	68.61	66.91
EES08262	Sorghum	mitochondrion, plastid	72.91	65.9
Os11t0244600-01	Rice	cytosol	64.56	64.56
VIT_18s0089g01330.t01	Wine grape	cytosol	26.08	25.62
KRH09259	Soybean	cytosol, nucleus, peroxisome	26.33	24.19
Bra028000.1-P	Field mustard	mitochondrion	22.53	23.99
CDY50184	Canola	mitochondrion	22.28	23.91
KRH38757	Soybean	cytosol, nucleus, peroxisome	26.08	23.73
CDX93766	Canola	mitochondrion	22.28	23.72
AT1G33340.1	Thale cress	cytosol, mitochondrion, nucleus	21.77	22.99
Solyc01g005170.1.1	Tomato	cytosol, mitochondrion, plastid	18.73	17.87
PGSC0003DMT400092428	Potato	cytosol, mitochondrion, nucleus	19.24	17.27
TraesCS5B01G296700.1	Wheat	mitochondrion	14.43	14.92
TraesCS7B01G430700.2	Wheat	cytosol	5.32	14.69
TraesCS7B01G393800.2	Wheat	cytosol	20.51	14.21
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	19.75	13.88
TraesCS4B01G207200.1	Wheat	cytosol, mitochondrion, plastid	21.77	13.48
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	19.24	13.48
TraesCS6B01G181800.1	Wheat	cytosol	19.24	13.17
TraesCS7B01G322300.1	Wheat	mitochondrion	18.73	13.1
TraesCS7B01G040500.1	Wheat	cytosol	17.47	12.23
TraesCS1B01G277200.1	Wheat	cytosol	18.73	12.23
TraesCS1B01G044800.1	Wheat	cytosol	18.99	12.14
TraesCS6B01G407500.2	Wheat	cytosol	16.71	11.17

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	InterPro:Clathrin_AP_dom2	InterPro:ENTH_VHS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987
GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR014712
PFAM:PF07651	PANTHER:PTHR22951	PANTHER:PTHR22951:SF14	SUPFAM:SSF48464	SUPFAM:SSF89009	EnsemblPlantsGene:TraesCS4B01G088300
EnsemblPlants:TraesCS4B01G088300.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:89303125..89304312

Molecular Weight (calculated)

42670.5 Da

IEP (calculated)

6.139

GRAVY (calculated)

-0.147

Length

395 amino acids

Sequence
(BLAST)

001: MKVFRGKIWA ALGSLMDHAG AASNKASTAA VPDRALLTDI EAAIARCTDG GGGGSVGDDR HVHEILFLVS NAPGAITFLS RRITARLEAA RTPATALRSL
101: LLVHRLLRAG DRYFEQDFRG LWASHDLRVD APRCGCSCSP LAASGAGVNY VTASTVTATG ACSFLHGYTA YLEERMQWVI NQSGNLEPIR PPPQDHDDKP
201: HPVSSYDVVA AEALLFKLAM CQRLLDVAVQ LLPDNNTSAS AAARSAFGIV LRESFKVYDA FNEGIDVLLR SRSVGRLSKS LRVSAQEVLR KACVQTPELK
301: EFYHKCKKSN VGKITEYPVV RVVTPAQASA IEIMPLACEE DGRKELGGAG VVAEENEGDA PFESKLETTI SAVWVEFDDE DHQAGREFTG DDHSS

Best Arabidopsis Sequence Match ( AT1G33340.1 )
(BLAST)

001: MRLDLSAKFR QVLGLAKDHA SIGRAIVQNY NEKAFFDIEV AVVRATSHDD CPVDDKTMHE ILFLVSNTPG SIPFLAEQIS RRLAKTRDCL VAGKTLLLFH
101: RLLRGSSRSI EQQLHIAHTS GHLQIGCSWF MMSLDSRSFV FLQNYVAYLQ ERVGWIINQA GKLEPVMSGG TKFSRYKEKS MDLVFHILPK CQEFIAQVLK
201: CSPVDAWPID NLVQAATGNI LKESFQVYMT YSDGMTALVS MLFDLSRPAR DLACGMLRKA SQQIQDLRIL YDKCRGFAGM KSLDYPSVQA ISMDHIVALE
301: ECSSYGGKRG FSLSTNLRDA ITCNELKQEQ HSASFSSTSP FSLPVETKIS MVWVVFDNED GEESDKQTEK AYER

Arabidopsis Description

Putative clathrin assembly protein At1g33340 [Source:UniProtKB/Swiss-Prot;Acc:Q9C502]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.