Factsheet for Bra028000.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93766	Canola	mitochondrion	99.19	99.19
AT1G33340.1	Thale cress	cytosol, mitochondrion, nucleus	84.64	83.96
VIT_18s0089g01330.t01	Wine grape	cytosol	52.02	48.01
KRH09259	Soybean	cytosol, nucleus, peroxisome	53.37	46.05
KRH38757	Soybean	cytosol, nucleus, peroxisome	52.02	44.47
HORVU4Hr1G015050.1	Barley	mitochondrion	24.26	22.78
TraesCS4B01G088300.1	Wheat	mitochondrion	23.99	22.53
TraesCS4A01G227800.1	Wheat	mitochondrion	23.99	22.53
Zm00001d049002_P001	Maize	mitochondrion	24.53	22.47
TraesCS4D01G085400.1	Wheat	mitochondrion	23.72	22.28
Zm00001d007272_P001	Maize	mitochondrion	22.91	21.52
Os11t0244600-01	Rice	cytosol	22.64	21.27
EES08262	Sorghum	mitochondrion, plastid	24.8	21.05
Bra033960.1-P	Field mustard	mitochondrion	18.33	18.68
Bra024772.1-P	Field mustard	mitochondrion	18.6	18.3
Bra004282.1-P	Field mustard	mitochondrion	17.52	18.01
Bra012491.1-P	Field mustard	mitochondrion	18.06	17.72
Solyc01g005170.1.1	Tomato	cytosol, mitochondrion, plastid	19.68	17.63
PGSC0003DMT400092428	Potato	cytosol, mitochondrion, nucleus	20.49	17.27
Bra007800.1-P	Field mustard	cytosol	26.68	16.15
Bra026195.1-P	Field mustard	cytosol	15.36	16.01
Bra038937.1-P	Field mustard	mitochondrion	22.64	15.27
Bra034252.1-P	Field mustard	cytosol	26.68	15.25
Bra030518.1-P	Field mustard	mitochondrion	23.99	15.08
Bra024871.1-P	Field mustard	cytosol	23.18	15.06
Bra017439.1-P	Field mustard	cytosol	23.18	15.06
Bra011333.1-P	Field mustard	cytosol	25.34	14.99
Bra036250.1-P	Field mustard	mitochondrion	23.99	14.81
Bra002750.1-P	Field mustard	cytosol	23.45	14.67
Bra032561.1-P	Field mustard	mitochondrion	23.45	14.57
Bra020460.1-P	Field mustard	cytosol	22.64	14.14
Bra013934.1-P	Field mustard	cytosol	22.64	13.98
Bra030600.1-P	Field mustard	cytosol, golgi, nucleus	22.64	13.02
Bra026647.1-P	Field mustard	cytosol	23.18	11.94
Bra015381.1-P	Field mustard	cytosol	19.95	11.62
Bra026179.1-P	Field mustard	cytosol, mitochondrion	23.18	11.23
Bra033369.1-P	Field mustard	cytosol	11.59	9.17

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	EnsemblPlantsGene:Bra028000	EnsemblPlants:Bra028000.1
EnsemblPlants:Bra028000.1-P	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	UniProt:M4EGT5
PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF14	SMART:SM00273	SUPFAM:SSF48464
SUPFAM:SSF89009	UniParc:UPI00025421FF	SEG:seg	:	:	:

Description

AT1G33340 (E=3e-160) | epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related

Coordinates

chrA09:+:19535420..19536535

Molecular Weight (calculated)

41609.4 Da

IEP (calculated)

7.866

GRAVY (calculated)

-0.077

Length

371 amino acids

Sequence
(BLAST)

001: MRLHLSAKFR QVLGHAKDQA SIGRAIVQNY NEKSFFDIEV AVVRATSHDD CPVGDKTMHE ILFLVSNTPG AVPFLAEQIS RRLAKTRDYL VAGKTLLLIH
101: RLLRSSSRCI EQQLHIAHTS GHLQIGCCWF MMSQDHPSFA FLQNYVAYLE ERVGWIINQA GKLEPVMSGG TKCSRYKEKS MDLVFHILPK CQEFIAKVLK
201: CSPVDVWPMD NLVQAATGSI LKESFHVYMT YSDGIAALSN MLFDLSRPAR DLACGMLRKA SQQIEDLRVM YEKCRGFTGM KSLDYPSVQA ITMDHIVALE
301: QCSSYNTCAG SVLKRTGGER GFSVSTNLRD SVTCNEKIAS TSLFLLPVET KISMVWVVFD NEESDKPTES I

Best Arabidopsis Sequence Match ( AT1G33340.1 )
(BLAST)

001: MRLDLSAKFR QVLGLAKDHA SIGRAIVQNY NEKAFFDIEV AVVRATSHDD CPVDDKTMHE ILFLVSNTPG SIPFLAEQIS RRLAKTRDCL VAGKTLLLFH
101: RLLRGSSRSI EQQLHIAHTS GHLQIGCSWF MMSLDSRSFV FLQNYVAYLQ ERVGWIINQA GKLEPVMSGG TKFSRYKEKS MDLVFHILPK CQEFIAQVLK
201: CSPVDAWPID NLVQAATGNI LKESFQVYMT YSDGMTALVS MLFDLSRPAR DLACGMLRKA SQQIQDLRIL YDKCRGFAGM KSLDYPSVQA ISMDHIVALE
301: ECSSYGGKRG FSLSTNLRDA ITCNELKQEQ HSASFSSTSP FSLPVETKIS MVWVVFDNED GEESDKQTEK AYER

Arabidopsis Description

Putative clathrin assembly protein At1g33340 [Source:UniProtKB/Swiss-Prot;Acc:Q9C502]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.