Factsheet for Bra038937.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71126	Canola	cytosol, mitochondrion	77.27	99.77
CDY12401	Canola	cytosol, mitochondrion	96.0	97.78
CDY41768	Canola	cytosol, mitochondrion	69.27	95.73
AT5G35200.2	Thale cress	cytosol	88.73	89.71
VIT_11s0016g05900.t01	Wine grape	cytosol	65.45	70.87
KRH20163	Soybean	cytosol	68.55	69.05
KRH03643	Soybean	mitochondrion	68.36	68.61
Solyc07g007820.2.1	Tomato	cytosol	67.09	65.54
GSMUA_Achr5P23570_001	Banana	cytosol	64.0	64.59
GSMUA_Achr6P03060_001	Banana	cytosol	64.18	64.53
Zm00001d037484_P002	Maize	cytosol, mitochondrion	62.73	62.61
KXG19435	Sorghum	cytosol, mitochondrion	62.73	61.17
TraesCS7A01G138400.1	Wheat	cytosol	61.82	60.28
HORVU7Hr1G028590.1	Barley	cytosol	61.82	60.18
TraesCS7B01G040500.1	Wheat	cytosol	61.64	60.11
TraesCS7D01G140200.1	Wheat	cytosol	61.45	59.93
PGSC0003DMT400017184	Potato	cytosol	46.91	59.86
Os06t0175500-01	Rice	plasma membrane	61.82	59.65
Zm00001d045154_P002	Maize	mitochondrion	61.82	56.86
KXG31293	Sorghum	cytosol	56.36	56.36
Os02t0803300-01	Rice	cytosol	58.18	56.24
Zm00001d052008_P003	Maize	cytosol	54.73	54.43
TraesCS6A01G370500.1	Wheat	cytosol	54.55	51.55
HORVU6Hr1G087330.4	Barley	cytosol	54.36	51.37
TraesCS6B01G407500.2	Wheat	cytosol	55.09	51.27
TraesCS6D01G354100.2	Wheat	cytosol	55.09	51.18
Bra024871.1-P	Field mustard	cytosol	47.45	45.71
Bra017439.1-P	Field mustard	cytosol	46.73	45.01
Bra002750.1-P	Field mustard	cytosol	47.64	44.18
Bra020460.1-P	Field mustard	cytosol	47.64	44.11
Bra013934.1-P	Field mustard	cytosol	47.27	43.26
Bra026647.1-P	Field mustard	cytosol	46.18	35.28
Bra026179.1-P	Field mustard	cytosol, mitochondrion	46.73	33.55
Bra030518.1-P	Field mustard	mitochondrion	30.18	28.14
Bra036250.1-P	Field mustard	mitochondrion	30.36	27.79
Bra032561.1-P	Field mustard	mitochondrion	30.0	27.64
Bra007800.1-P	Field mustard	cytosol	29.45	26.43
Bra011333.1-P	Field mustard	cytosol	29.27	25.68
Bra034252.1-P	Field mustard	cytosol	30.0	25.42
Bra033960.1-P	Field mustard	mitochondrion	15.09	22.8
Bra028000.1-P	Field mustard	mitochondrion	15.27	22.64
Bra033369.1-P	Field mustard	cytosol	19.27	22.6
Bra012491.1-P	Field mustard	mitochondrion	15.45	22.49
Bra024772.1-P	Field mustard	mitochondrion	14.73	21.49
Bra004282.1-P	Field mustard	mitochondrion	13.64	20.78
Bra026195.1-P	Field mustard	cytosol	12.91	19.94
Bra015381.1-P	Field mustard	cytosol	22.18	19.15
Bra030600.1-P	Field mustard	cytosol, golgi, nucleus	22.0	18.76

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:35.1	InterPro:ANTH_dom	EnsemblPlantsGene:Bra038937	EnsemblPlants:Bra038937.1
EnsemblPlants:Bra038937.1-P	InterPro:Clathrin_AP_dom2	ncoils:Coil	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	UniProt:M4FCW7	PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951
PANTHER:PTHR22951:SF32	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI000254655C	SEG:seg

Description

AT5G35200 (E=2e-246) | epsin N-terminal homology (ENTH) domain-containing protein

Coordinates

chrA08:+:8373864..8376701

Molecular Weight (calculated)

61920.6 Da

IEP (calculated)

6.175

GRAVY (calculated)

-0.464

Length

550 amino acids

Sequence
(BLAST)

001: MSGSQSSLRR YLGAIKDTTT VSLAKVNSGY KELDIAIVKA TNHVERPSKE RYIRAIFMAI SATRPRADVA YCIHALARRL SKTHNWAVAL KTLIVIHRAL
101: REVDQTFHEE VINYSRSRSH MLNMSHFKDD SSPNAWVYST WVRFYALFLE ERLECFRVLK YDVEIDPPRT KELDTPDLLE QLPALQELLF RVLDCQPEGA
201: AVQNHIIQLA LSMVVTESTK IYQALTDGID NLVDKFFEMQ RNDALKALDM YRRAVKQAER LSEFYEVCKS VYVGRGDSFV KIEQPPTSFL QAMEEYVKEA
301: PLAAGAKKEQ AMEKLAAPKE ILAIEYEKPP EVVEEKPKSP EPPVKAEAEK PVEKQPDLLS MDDPAPVVSE LDEKNALALA IVPVTVEQPV STIDFTNGNS
401: SGWELALVTA PSSNEVAAAN SKLAGGLDKL TLDSLYEDAI RVNQQQNRSH NPWEQHHPVH NGPMMHHQPF FASNGVSAPP PVQMANQYHQ PYGFQHQNSG
501: MMMGPVQPYQ QQQQQQQNMN PFGNPFVSNG NPHQPYGSVQ GGYNPYSSLM

Best Arabidopsis Sequence Match ( AT5G35200.1 )
(BLAST)

001: MSGGGGSQSS LRRYLGAIKD TTTVSLAKVN SDYKELDIAI VKATNHVERP SKERYIRAIF MAISATRPRA DVAYCIHALA RRLSRTHNWA VALKTLIVIH
101: RALREVDQTF HEEVINYSRS RSHMLNMSHF KDDSGPNAWA YSAWVRFYAL FLEERLECFR VLKYDVEVDP PRTKDLDTPD LLEQLPALQE LLFRVLDCQP
201: EGAAVQNHII QLALSMVISE STKIYQALTD GIDNLVDKFF DMQRNDAVKA LDMYRRAVKQ AGRLSEFFEV CKSVNVGRGE RFIKIEQPPT SFLQAMEEYV
301: KEAPLAAGVK KEQVVEKLTA PKEILAIEYE IPPKVVEEKP ASPEPVKAEA EKPVEKQPDL LSMDDPAPMV SELEEKNALA LAIVPVSVEQ PHSTTDFTNG
401: NSTGWELALV TAPSSNEGAA ADSKLAGGLD KLTLDSLYED AIRVSQQQNR SYNPWEQNPV HNGHMMHQPF YASNGVAAPQ PFQMANQNHQ TFGYQHQNAG
501: MMMGPVQQPY QQQQQNMNNP FGNPFVSNGN PQQPQGYNPY PRYM

Arabidopsis Description

Putative clathrin assembly protein At5g35200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.