Factsheet for Bra002750.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38276	Canola	cytosol	99.33	99.49
CDY52732	Canola	cytosol	97.98	99.32
Bra020460.1-P	Field mustard	cytosol	93.25	93.1
AT5G57200.1	Thale cress	cytosol	90.73	91.03
Bra013934.1-P	Field mustard	cytosol	81.11	80.03
Os06t0661400-01	Rice	cytosol	29.17	69.2
KRH12315	Soybean	cytosol	66.44	66.11
KRH37330	Soybean	cytosol	66.1	65.77
GSMUA_Achr7P04960_001	Banana	cytosol	60.71	65.45
VIT_11s0103g00620.t01	Wine grape	cytosol	65.09	65.31
KRH19094	Soybean	cytosol	62.39	64.46
KRH02791	Soybean	cytosol	62.06	64.11
PGSC0003DMT400036570	Potato	cytosol	61.38	63.53
Solyc02g043810.2.1	Tomato	cytosol	61.55	63.15
GSMUA_Achr1P15690_001	Banana	cytosol	59.19	62.79
GSMUA_Achr4P20660_001	Banana	cytosol	57.34	61.04
EES06356	Sorghum	cytosol	57.84	60.18
GSMUA_Achr3P05590_001	Banana	cytosol	55.14	59.89
Zm00001d015430_P001	Maize	cytosol	56.16	57.71
Os02t0175700-01	Rice	plasma membrane	55.99	56.95
KXG20534	Sorghum	cytosol, mitochondrion	55.65	56.9
Zm00001d036672_P005	Maize	cytosol	54.97	56.7
Os06t0699800-00	Rice	cytosol	41.48	56.04
KXG20765	Sorghum	mitochondrion	53.46	55.81
TraesCS6D01G143700.1	Wheat	cytosol	54.97	55.54
TraesCS6B01G181800.1	Wheat	cytosol	53.96	55.46
TraesCS7B01G393800.2	Wheat	cytosol	52.95	55.09
Bra024871.1-P	Field mustard	cytosol	52.78	54.82
HORVU7Hr1G109970.5	Barley	cytosol	52.78	54.72
TraesCS7A01G490500.2	Wheat	cytosol	52.78	54.53
TraesCS7D01G476900.2	Wheat	cytosol	53.12	54.4
TraesCS6A01G154100.1	Wheat	cytosol	53.63	54.27
TraesCS7A01G421900.1	Wheat	mitochondrion	51.77	53.86
TraesCS7D01G414100.1	Wheat	mitochondrion	51.43	53.7
TraesCS7B01G322300.1	Wheat	mitochondrion	51.1	53.63
Bra017439.1-P	Field mustard	cytosol	51.26	53.24
HORVU7Hr1G097510.7	Barley	mitochondrion	45.7	53.03
HORVU6Hr1G030980.1	Barley	cytosol	53.96	51.7
TraesCS7B01G430700.2	Wheat	cytosol	11.64	48.25
Bra038937.1-P	Field mustard	mitochondrion	44.18	47.64
Bra026647.1-P	Field mustard	cytosol	51.6	42.5
Bra026179.1-P	Field mustard	cytosol, mitochondrion	50.76	39.3
Bra007800.1-P	Field mustard	cytosol	29.01	28.06
Bra011333.1-P	Field mustard	cytosol	29.51	27.91
Bra030518.1-P	Field mustard	mitochondrion	27.66	27.8
Bra034252.1-P	Field mustard	cytosol	30.19	27.58
Bra032561.1-P	Field mustard	mitochondrion	27.66	27.47
Bra036250.1-P	Field mustard	mitochondrion	27.66	27.29
Bra012491.1-P	Field mustard	mitochondrion	16.19	25.4
Bra033960.1-P	Field mustard	mitochondrion	15.35	25.0
Bra004282.1-P	Field mustard	mitochondrion	14.67	24.1
Bra033369.1-P	Field mustard	cytosol	19.06	24.09
Bra024772.1-P	Field mustard	mitochondrion	15.18	23.87
Bra028000.1-P	Field mustard	mitochondrion	14.67	23.45
Bra026195.1-P	Field mustard	cytosol	13.32	22.19
Bra015381.1-P	Field mustard	cytosol	20.74	19.31
Bra030600.1-P	Field mustard	cytosol, golgi, nucleus	20.74	19.07

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	InterPro:ANTH_dom	EnsemblPlantsGene:Bra002750	EnsemblPlants:Bra002750.1
EnsemblPlants:Bra002750.1-P	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016043	GO:GO:0030136
GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809	InterPro:IPR014712	UniProt:M4CEW8
PFAM:PF07651	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF56	SMART:SM00273	SUPFAM:SSF48464
SUPFAM:SSF89009	UniParc:UPI0002544DCD	SEG:seg	:	:	:

Description

AT5G57200 (E=1e-252) | epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related

Coordinates

chrA10:+:7870285..7873273

Molecular Weight (calculated)

66873.5 Da

IEP (calculated)

4.731

GRAVY (calculated)

-0.626

Length

593 amino acids

Sequence
(BLAST)

001: MGTFTSLRKA YGALKDSTTV GLAKVNSEFK DLDIAIVKAT NHVESPPKER HVRKIFSATS AIQPRADVAY CIHALSKRLS KTRTWVVAMK VLIVIHRTLR
101: EGDPTFREEL LNYSHRRHIL RISNFKDDTS PLAWDCSAWV RTYALFLEER LECYRVLKYD IEAERLPKGA GAASKTHRTR MLSGEDLLEQ LPALQQLLYR
201: LIGFLQPEGA AYSNYLIQYA LALVLKESFK IYCAINDGII NLVDMFFEMT RHDAVKALNI YKRAGQQAEN LAEFYDYCKG LELARNFQFP TLRQPPPSFL
301: ATMEEYIKEA PQSGSVQKKL EYEEKEEEPE PQEEEQPEEP AEDENQNTET DQPLIEEEEE EPIEEKEEEE VKPSPLIDTD DLLGLNEINP QAAEIEERNA
401: LALAIYPPGH ETSGPSNSLS LIEAGGSGWE LALVTPQNNN NNNNPRPTVA TKLGGGFDNL LLDSLYEDDT ARRQIQLTNA GYGFGATATH GEPHSSNPNP
501: FGMQQDPFAM SSNMAPPTNV QMAMQQQQMM MMNNNQNPYN NNNNYSPYHQ QHQHFSPYPS SSASANPFGD TFLALPAPPS SSTQQQHNNH MLL

Best Arabidopsis Sequence Match ( AT5G57200.1 )
(BLAST)

001: MGTFTSFRKA YGALKDTTTV GLAKVNSEFK DLDIAIVKAT NHVESPPKER HVRKIFSATS VIQPRADVAY CIHALSKRLS KTRNWVVAMK VLIVIHRTLR
101: EGDPTFREEL LNYSHRRHIL RISNFKDDTS PLAWDCSAWV RTYALFLEER LECYRVLKYD IEAERLPKAS GAASKTHRTR MLSGEDLLEQ LPALQQLLYR
201: LIGCQPEGAA YSNYLIQYAL ALVLKESFKI YCAINDGIIN LVDMFFEMSR HDAVKALNIY KRAGQQAENL AEFYDYCKGL ELARNFQFPT LRQPPPSFLA
301: TMEEYIKEAP QSGSVQKKLE YQEKEEEEQE QEEEQPEEPA EEENQNENTE NDQPLIEEEE EEPKEEIEVE EAKPSPLIDT DDLLGLHEIN PKAAEIEQNN
401: AFSLAIYPPG HETSAPSNSL SLIEAGGSGW ELALVTPQNN NNNNNNPRPV IATKLGGGFD NLLLDSLYED DTARRQIQLT NAGYGFGATA IPGALASSNP
501: NPFGVQQDPF AMSNNMAPPT NVQMAMQQQQ MMMMNNQSPY NNNYSPYHHH QFSPNPSTSS SPNPFGDPFL ALPAPPSSTT QQQYSPNHML L

Arabidopsis Description

Putative clathrin assembly protein At5g57200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.