Factsheet for Os02t0175700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06356	Sorghum	cytosol	73.58	75.26
Os06t0661400-01	Rice	cytosol	31.9	74.4
Zm00001d015430_P001	Maize	cytosol	71.7	72.44
TraesCS6D01G143700.1	Wheat	cytosol	72.56	72.06
Solyc12g017440.1.1	Tomato	cytosol	36.71	71.57
TraesCS6B01G181800.1	Wheat	cytosol	70.5	71.23
TraesCS6A01G154100.1	Wheat	cytosol	70.15	69.8
CDY42239	Canola	cytosol	39.28	67.95
HORVU6Hr1G030980.1	Barley	cytosol	71.7	67.53
GSMUA_Achr7P04960_001	Banana	cytosol	62.44	66.18
GSMUA_Achr4P20660_001	Banana	cytosol	61.06	63.91
GSMUA_Achr1P15690_001	Banana	cytosol	60.89	63.51
PGSC0003DMT400036570	Potato	cytosol	56.95	57.94
KRH02791	Soybean	cytosol	56.95	57.84
KRH19094	Soybean	cytosol	56.95	57.84
Solyc02g043810.2.1	Tomato	cytosol	57.29	57.79
KRH37330	Soybean	cytosol	58.15	56.88
VIT_11s0103g00620.t01	Wine grape	cytosol	57.63	56.85
CDY47927	Canola	cytosol	49.23	56.83
Os05t0549000-01	Rice	plasma membrane	54.72	56.26
CDY38276	Canola	cytosol	57.12	56.25
CDY52732	Canola	cytosol	56.43	56.24
Bra002750.1-P	Field mustard	cytosol	56.95	55.99
Os01t0694900-01	Rice	cytosol	54.37	55.81
KRH12315	Soybean	cytosol	56.95	55.7
Bra020460.1-P	Field mustard	cytosol	56.43	55.39
AT5G57200.1	Thale cress	cytosol	56.09	55.33
Os06t0699800-00	Rice	cytosol	40.31	53.53
AT4G25940.1	Thale cress	cytosol	54.2	52.58
CDX89382	Canola	cytosol	54.03	52.41
Bra013934.1-P	Field mustard	cytosol	53.86	52.25
CDX94400	Canola	cytosol	53.34	52.18
Os06t0175500-01	Rice	plasma membrane	45.8	46.84
Os02t0803300-01	Rice	cytosol	43.57	44.64
Solyc12g017430.1.1	Tomato	nucleus	14.07	38.68
PGSC0003DMT400025029	Potato	nucleus	17.5	35.92
Os05t0112101-01	Rice	plasma membrane	27.96	28.06
Os03t0275500-01	Rice	plasma membrane	30.53	27.34
Os01t0881100-01	Rice	mitochondrion	23.67	26.49
Os05t0426100-00	Rice	cytosol	28.47	24.92
Os08t0467300-01	Rice	mitochondrion	15.95	23.48
Os11t0244600-01	Rice	cytosol	12.69	18.73

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	EntrezGene:4328473	EMBL:AK069542	InterPro:ANTH_dom
ProteinID:BAD27613.1	ProteinID:BAF07971.1	ProteinID:BAS77249.1	InterPro:Clathrin_AP_dom2	ProteinID:EEE56421.1	InterPro:ENTH
InterPro:ENTH_VHS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008289
GO:GO:0009987	GO:GO:0016043	GO:GO:0030136	GO:GO:0030276	GO:GO:0048268	InterPro:IPR008942
InterPro:IPR013809	InterPro:IPR014712	EnsemblPlantsGene:Os02g0175700	EnsemblPlants:Os02t0175700-01	PFAM:PF07651	PFscan:PS50942
PANTHER:PTHR22951	PANTHER:PTHR22951:SF21	UniProt:Q6EUQ6	SMART:SM00273	SUPFAM:SSF48464	SUPFAM:SSF89009
UniParc:UPI00003CE46E	RefSeq:XP_015627195.1	SEG:seg	:	:	:

Description

Epsin-like, N-terminal domain containing protein. (Os02t0175700-01)

Coordinates

chr2:-:4135897..4140382

Molecular Weight (calculated)

66108.7 Da

IEP (calculated)

5.743

GRAVY (calculated)

-0.558

Length

583 amino acids

Sequence
(BLAST)

001: MGSWRRKAYG ALKDSTKVGL AKVNSDFKEL DIAIVKATNH VECPPKDRHV RKIFVATSIN RPRADVQYCI YALSRRLSKT KNWTVALKTL IVVHRLLREG
101: DPTFKEEFLA YSYKGSVLQR ANFKDDSSQL AWDCSAWVRA YALFLEERLE CFRILKFDIE TERLMRSPEC SSKAHSRTRT LPCIELLEQL PALQQLLFRL
201: IGCQPEGAAG TNYLIQYALA LVLKESFKIY CAINDGIINL VDMFFDMPKY DAIKALVVYK RAGQQAEDLS DFYDSCKQLE LARTFQFPTL RQPPSSFIAT
301: MEEYIREAPR PSINSVENGE RKLVTYDQEA TEESEKPAEE EKDEPAESEQ EQEPKQEPKP PETTGDLLNL DAEVSPLVAE LEENNAWALA IVGTGDQTKA
401: STSLDLFSGN TSGWELALVT APSSTSQTVQ TKLAGGFDKL LLDSLYEDET RRRQIAGVTY TGSIGGGAPN PFDTNDPFAT SSSFLPPSNV QFAMLNQQQH
501: QYYQSQHQQQ YYQPHHFQDH QHHHNMYFQT HYQQNQIYQQ QQQQQHQYPA PQAGSSNPFG DPFGDLVPMA MAVSQKHGHS SLI

Best Arabidopsis Sequence Match ( AT5G57200.1 )
(BLAST)

001: MGTFTSFRKA YGALKDTTTV GLAKVNSEFK DLDIAIVKAT NHVESPPKER HVRKIFSATS VIQPRADVAY CIHALSKRLS KTRNWVVAMK VLIVIHRTLR
101: EGDPTFREEL LNYSHRRHIL RISNFKDDTS PLAWDCSAWV RTYALFLEER LECYRVLKYD IEAERLPKAS GAASKTHRTR MLSGEDLLEQ LPALQQLLYR
201: LIGCQPEGAA YSNYLIQYAL ALVLKESFKI YCAINDGIIN LVDMFFEMSR HDAVKALNIY KRAGQQAENL AEFYDYCKGL ELARNFQFPT LRQPPPSFLA
301: TMEEYIKEAP QSGSVQKKLE YQEKEEEEQE QEEEQPEEPA EEENQNENTE NDQPLIEEEE EEPKEEIEVE EAKPSPLIDT DDLLGLHEIN PKAAEIEQNN
401: AFSLAIYPPG HETSAPSNSL SLIEAGGSGW ELALVTPQNN NNNNNNPRPV IATKLGGGFD NLLLDSLYED DTARRQIQLT NAGYGFGATA IPGALASSNP
501: NPFGVQQDPF AMSNNMAPPT NVQMAMQQQQ MMMMNNQSPY NNNYSPYHHH QFSPNPSTSS SPNPFGDPFL ALPAPPSSTT QQQYSPNHML L

Arabidopsis Description

Putative clathrin assembly protein At5g57200 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.