Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0661400-01 | Rice | cytosol | 48.96 | 66.0 |
| CDY47927 | Canola | cytosol | 90.21 | 60.2 |
| CDY52732 | Canola | cytosol | 91.39 | 52.65 |
| AT5G57200.1 | Thale cress | cytosol | 91.39 | 52.12 |
| CDY38276 | Canola | cytosol | 91.1 | 51.86 |
| CDY41768 | Canola | cytosol, mitochondrion | 55.49 | 46.98 |
| CDX94400 | Canola | cytosol | 82.2 | 46.48 |
| CDX89382 | Canola | cytosol | 82.79 | 46.42 |
| Os06t0699800-00 | Rice | cytosol | 59.94 | 46.01 |
| GSMUA_Achr7P04960_001 | Banana | cytosol | 73.29 | 44.91 |
| VIT_11s0103g00620.t01 | Wine grape | cytosol | 78.04 | 44.5 |
| KRH37330 | Soybean | cytosol | 78.64 | 44.46 |
| GSMUA_Achr1P15690_001 | Banana | cytosol | 73.0 | 44.01 |
| CDY71126 | Canola | cytosol, mitochondrion | 55.49 | 43.9 |
| KRH12315 | Soybean | cytosol | 77.15 | 43.62 |
| GSMUA_Achr3P05590_001 | Banana | cytosol | 69.44 | 42.86 |
| PGSC0003DMT400036570 | Potato | cytosol | 72.4 | 42.58 |
| GSMUA_Achr4P20660_001 | Banana | cytosol | 70.33 | 42.55 |
| KRH02791 | Soybean | cytosol | 72.11 | 42.33 |
| Solyc02g043810.2.1 | Tomato | cytosol | 72.4 | 42.21 |
| KRH19094 | Soybean | cytosol | 71.81 | 42.16 |
| TraesCS7B01G430700.2 | Wheat | cytosol | 17.51 | 41.26 |
| HORVU7Hr1G097510.7 | Barley | mitochondrion | 62.31 | 41.1 |
| EES06356 | Sorghum | cytosol | 69.14 | 40.88 |
| CDY17660 | Canola | cytosol | 67.66 | 39.93 |
| Zm00001d015430_P001 | Maize | cytosol | 68.25 | 39.86 |
| CDY36239 | Canola | cytosol | 67.36 | 39.75 |
| TraesCS6B01G181800.1 | Wheat | cytosol | 67.95 | 39.69 |
| CDY17459 | Canola | cytosol | 66.77 | 39.47 |
| Os02t0175700-01 | Rice | plasma membrane | 67.95 | 39.28 |
| CDY04095 | Canola | cytosol | 66.47 | 39.23 |
| CDY09433 | Canola | cytosol, mitochondrion | 66.77 | 38.99 |
| CDY48813 | Canola | cytosol | 67.36 | 38.94 |
| TraesCS6D01G143700.1 | Wheat | cytosol | 67.66 | 38.84 |
| Zm00001d036672_P005 | Maize | cytosol | 65.88 | 38.61 |
| KXG20765 | Sorghum | mitochondrion | 64.99 | 38.56 |
| KXG20534 | Sorghum | cytosol, mitochondrion | 66.17 | 38.45 |
| TraesCS6A01G154100.1 | Wheat | cytosol | 66.17 | 38.05 |
| HORVU7Hr1G109970.5 | Barley | cytosol | 63.5 | 37.41 |
| TraesCS7B01G393800.2 | Wheat | cytosol | 62.91 | 37.19 |
| TraesCS7A01G421900.1 | Wheat | mitochondrion | 62.91 | 37.19 |
| TraesCS7B01G322300.1 | Wheat | mitochondrion | 62.31 | 37.17 |
| HORVU6Hr1G030980.1 | Barley | cytosol | 68.25 | 37.16 |
| TraesCS7D01G414100.1 | Wheat | mitochondrion | 62.31 | 36.97 |
| TraesCS7D01G476900.2 | Wheat | cytosol | 63.5 | 36.96 |
| TraesCS7A01G490500.2 | Wheat | cytosol | 62.61 | 36.76 |
| CDY12401 | Canola | cytosol, mitochondrion | 56.08 | 35.0 |
| CDY45299 | Canola | mitochondrion | 64.69 | 31.69 |
| CDY53525 | Canola | cytosol, mitochondrion | 64.99 | 31.42 |
| CDY64692 | Canola | mitochondrion | 24.04 | 21.37 |
| CDY01884 | Canola | mitochondrion | 22.55 | 21.29 |
| CDX96047 | Canola | mitochondrion | 22.55 | 21.05 |
| CDY18283 | Canola | cytosol, nucleus, peroxisome | 29.97 | 21.04 |
| CDY03862 | Canola | mitochondrion | 23.74 | 21.0 |
| CDY12691 | Canola | mitochondrion | 22.55 | 20.88 |
| CDX81471 | Canola | mitochondrion | 22.55 | 20.65 |
| CDY50184 | Canola | mitochondrion | 22.26 | 20.38 |
| CDY15448 | Canola | mitochondrion | 34.12 | 20.1 |
| CDX93766 | Canola | mitochondrion | 21.96 | 19.95 |
| CDY32494 | Canola | mitochondrion | 33.83 | 19.93 |
| CDX76976 | Canola | cytosol | 35.01 | 19.9 |
| CDY60368 | Canola | mitochondrion | 22.26 | 19.84 |
| CDY11530 | Canola | cytosol | 34.12 | 19.83 |
| CDY35361 | Canola | cytosol | 34.72 | 19.8 |
| CDY45281 | Canola | cytosol | 19.88 | 19.53 |
| CDY57160 | Canola | mitochondrion | 21.66 | 19.31 |
| CDY41097 | Canola | cytosol | 19.58 | 19.19 |
| CDX68831 | Canola | cytosol | 33.53 | 19.12 |
| CDX75232 | Canola | cytosol | 33.53 | 19.06 |
| CDY21904 | Canola | mitochondrion | 33.53 | 18.86 |
| CDY22070 | Canola | mitochondrion | 33.53 | 18.77 |
| CDY15531 | Canola | cytosol, golgi, nucleus | 31.45 | 17.38 |
| CDY53396 | Canola | cytosol | 29.97 | 16.97 |
| CDX86594 | Canola | cytosol, golgi, nucleus | 31.75 | 16.46 |
| CDX89917 | Canola | cytosol | 19.29 | 13.86 |
| CDY18145 | Canola | cytosol | 18.99 | 13.73 |
| CDX76760 | Canola | cytosol | 17.8 | 12.85 |
| CDX76977 | Canola | cytosol | 18.1 | 11.69 |
| CDX86691 | Canola | cytosol, mitochondrion | 35.01 | 11.67 |
| CDY37444 | Canola | nucleus | 1.48 | 1.78 |
Protein Annotations
| Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | MapMan:22.1.6.2 | GO:A0A078HY14 | UniProt:A0A078HY14 | InterPro:ANTH_dom |
| EnsemblPlants:CDY42239 | ProteinID:CDY42239 | ProteinID:CDY42239.1 | InterPro:Clathrin_AP_dom2 | InterPro:ENTH | InterPro:ENTH_VHS |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0030136 | GO:GO:0030276 | GO:GO:0048268 | EnsemblPlantsGene:GSBRNA2T00074460001 | InterPro:IPR008942 |
| InterPro:IPR013809 | InterPro:IPR014712 | PFAM:PF07651 | PFscan:PS50942 | PANTHER:PTHR22951 | PANTHER:PTHR22951:SF56 |
| SMART:SM00273 | SUPFAM:SSF48464 | SUPFAM:SSF89009 | UniParc:UPI0004EEECFA | SEG:seg | : |
Description
BnaC02g11760DBnaC02g11760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HY14]
Coordinates
chrLK032519:+:61170..73249
Molecular Weight (calculated)
38590.4 Da
IEP (calculated)
9.086
GRAVY (calculated)
-0.239
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTFTSLRKA YGALKDSTTV GLAKVNSEFK DLDIAIVKAT NHVESPPKER HVRKIFSATS VIQPWSLPRA DIAYCIHALS KRLSKTRTWV VSSFLSCFAI
101: IHRTLREGDP TFREELLNYS HRRHTLRISN FKDDTSPLAW DCSGWVRTYA LFLEERLECY RVLKYDIEAE RLPKASGAAS RTHRTRMLSG EDLLEQLPAL
201: QQLLFRLIGC QPEGAAYSNY LIHYALALVL KESFKIYCAI NDGIINLVDM FFEMTRHDAV KALNIYNRAG QQAENLAEFY DYCKGLELAR NFQFPTLRQP
301: PPSFLATMEE YIKEAPQSGS VQKKLVKMNF ISSYFST
101: IHRTLREGDP TFREELLNYS HRRHTLRISN FKDDTSPLAW DCSGWVRTYA LFLEERLECY RVLKYDIEAE RLPKASGAAS RTHRTRMLSG EDLLEQLPAL
201: QQLLFRLIGC QPEGAAYSNY LIHYALALVL KESFKIYCAI NDGIINLVDM FFEMTRHDAV KALNIYNRAG QQAENLAEFY DYCKGLELAR NFQFPTLRQP
301: PPSFLATMEE YIKEAPQSGS VQKKLVKMNF ISSYFST
001: MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL
Arabidopsis Description
Putative clathrin assembly protein At1g14910 [Source:UniProtKB/Swiss-Prot;Acc:P94017]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.