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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017439.1-P Field mustard cytosol 100.0 100.0
CDY17459 Canola cytosol 95.62 95.79
CDY36239 Canola cytosol 90.02 90.02
CDY17660 Canola cytosol 90.02 90.02
CDY09433 Canola cytosol, mitochondrion 90.72 89.77
CDY48813 Canola cytosol 91.42 89.54
AT2G01600.1 Thale cress cytosol, mitochondrion 86.34 86.34
KRH42533 Soybean cytosol 71.8 72.18
KRH58627 Soybean nucleus 71.63 71.88
VIT_01s0011g05330.t01 Wine grape cytosol, mitochondrion 69.53 70.02
Solyc04g007860.2.1 Tomato cytosol, plastid 68.83 69.8
PGSC0003DMT400075923 Potato cytosol 68.48 69.45
KRH38239 Soybean cytosol 67.08 69.13
CDY42239 Canola cytosol 39.23 66.47
GSMUA_Achr4P13420_001 Banana cytosol 60.07 64.23
GSMUA_Achr9P21890_001 Banana cytosol 62.17 63.39
Zm00001d038892_P001 Maize mitochondrion 61.65 62.52
EES19899 Sorghum cytosol, mitochondrion, plastid 61.65 62.41
Os05t0549000-01 Rice plasma membrane 61.82 62.26
TraesCS1D01G375800.1 Wheat cytosol, mitochondrion, plastid 60.95 61.59
TraesCS1B01G388800.1 Wheat cytosol, mitochondrion, plastid 60.77 61.52
Os01t0694900-01 Rice cytosol 61.12 61.44
TraesCS1A01G369700.1 Wheat cytosol, mitochondrion, plastid 60.77 61.42
EES01312 Sorghum cytosol 59.54 60.39
TraesCS3B01G292000.2 Wheat cytosol, mitochondrion, plastid 59.37 60.32
TraesCS3A01G258900.1 Wheat cytosol 58.84 60.11
TraesCS3D01G259000.2 Wheat cytosol 59.02 59.86
CDY45299 Canola mitochondrion 69.35 57.56
CDY53525 Canola cytosol, mitochondrion 70.05 57.39
Zm00001d009452_P007 Maize cytosol, mitochondrion, plastid 56.39 55.33
HORVU1Hr1G078340.3 Barley plastid 60.77 54.82
CDY47927 Canola cytosol 47.81 54.06
Zm00001d043773_P003 Maize cytosol 57.79 52.63
CDY52732 Canola cytosol 53.42 52.14
CDY41768 Canola cytosol, mitochondrion 36.25 52.01
CDY38276 Canola cytosol 53.42 51.52
CDY71126 Canola cytosol, mitochondrion 38.18 51.17
CDX94400 Canola cytosol 52.19 50.0
CDX89382 Canola cytosol 52.36 49.75
CDY12401 Canola cytosol, mitochondrion 44.48 47.04
CDY15448 Canola mitochondrion 29.42 29.37
CDY32494 Canola mitochondrion 28.72 28.67
CDX76976 Canola cytosol 29.6 28.5
CDY35361 Canola cytosol 29.42 28.43
CDY11530 Canola cytosol 28.72 28.28
CDY21904 Canola mitochondrion 29.07 27.71
CDX68831 Canola cytosol 28.55 27.58
CDY22070 Canola mitochondrion 29.07 27.57
CDX75232 Canola cytosol 28.55 27.49
CDX89917 Canola cytosol 20.49 24.95
CDY64692 Canola mitochondrion 16.46 24.8
CDY12691 Canola mitochondrion 15.76 24.73
CDY18145 Canola cytosol 20.14 24.68
CDX81471 Canola mitochondrion 15.76 24.46
CDY03862 Canola mitochondrion 16.11 24.15
CDY18283 Canola cytosol, nucleus, peroxisome 19.79 23.54
CDY50184 Canola mitochondrion 15.06 23.37
CDY60368 Canola mitochondrion 15.41 23.28
CDY01884 Canola mitochondrion 14.54 23.25
CDX93766 Canola mitochondrion 14.89 22.91
CDY57160 Canola mitochondrion 15.06 22.75
CDY45281 Canola cytosol 13.66 22.74
CDX96047 Canola mitochondrion 14.36 22.71
CDY41097 Canola cytosol 13.31 22.09
CDX76977 Canola cytosol 18.91 20.69
CDY15531 Canola cytosol, golgi, nucleus 22.07 20.66
CDX76760 Canola cytosol 16.81 20.56
CDY53396 Canola cytosol 21.19 20.34
CDX86594 Canola cytosol, golgi, nucleus 22.94 20.15
CDY37444 Canola nucleus 8.58 17.44
CDX86691 Canola cytosol, mitochondrion 29.77 16.82
Protein Annotations
Gene3D:1.20.58.150Gene3D:1.25.40.90MapMan:22.1.6.2GO:A0A078EQ62InterPro:ANTH_domEnsemblPlants:CDY04095
ProteinID:CDY04095ProteinID:CDY04095.1InterPro:Clathrin_AP_dom2InterPro:ENTHInterPro:ENTH_VHSGO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005543GO:GO:0005545GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008289GO:GO:0009987GO:GO:0016043
GO:GO:0030136GO:GO:0030276GO:GO:0048268EnsemblPlantsGene:GSBRNA2T00117729001InterPro:IPR008942InterPro:IPR013809
InterPro:IPR014712PFAM:PF07651PFscan:PS50942PANTHER:PTHR22951PANTHER:PTHR22951:SF54SMART:SM00273
SUPFAM:SSF48464SUPFAM:SSF89009UniParc:UPI000254233FSEG:seg::
Description
BnaA09g18730D
Coordinates
chrLK031949:+:58711..62399
Molecular Weight (calculated)
63321.2 Da
IEP (calculated)
4.797
GRAVY (calculated)
-0.426
Length
571 amino acids
Sequence
(BLAST)
001: MGTLQTWRKA YGALKDTTKV GLVRVNSDYA DLDVAIVKAT NHVECPPKDR HLRKIFAATA VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRVRIL QISNFKDDSG PIAWDCSAWV RTYALFLEER LECFRVLRYD TEAEPLTKAT PGHDKGYSRT RDLDGEEILL QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMP KHEAITSLEI YKRAGQQARS LSEFYEACKG LELARNFQFP VLREPPQSFL
301: ATMEEYIKEA PRAVDAPAEP LLLTYRPDDG LPDQDTEPSH EERELVLPSD DVVLASEDTE YSPPPPPSAT TQSQSIIDTD DLLGLNTSAP DASAIEDQNA
401: LALAIISNDG NSSTPRSFQA NDYDPTGWEL ALVTTPSNDI SAATDRQLAG GLDTLTLNSL YDDGAYIASQ RPVYGAPAPN PFEVHDPFAT SNGTPPPQQP
501: AVNNPFGAYQ PPYGQHQLQL ALAPNPQSNN NSSNPFGDFG EFPVSQQPNT SGFGDFAVNQ HNNPFRSTGL I
Best Arabidopsis Sequence Match ( AT1G14910.1 )
(BLAST)
001: MGTLQSWRRA YGALKDTTKV GLVRVNSDYA ELDVAIVKAT NHVECPPKDR HLRKIFLATS AIRPRADVAY CIHALSRRLH KTRNWTVALK ALLVIHRLLR
101: DGDPTFREEL LNFSQKGRIM QISNFKDDSS PVAWDCSGWV RTYALFLEER LECFRVLKYD IEAERLPKVS PGQEKGYSKT RDLDGEKLLE QLPALQQLLH
201: RLIGCKPEGA AKHNHIIQYA LSLVLKESFK VYCAINEGII NLVEKFFEMP RHEAIKALEI YKRAGLQAGN LSAFYEVCKG LELARNFQFP VLREPPQSFL
301: TTMEEYMRDA PQMVDVTSGP LLLTYTPDDG LTSEDVGPSH EEHETSSPSD SAVVPSEETQ LSSQSPPSVE TPQNFIDTDD LLGLHDDTPD PLAILDQNAL
401: ALALVSNDVD SSPFSFGQAR DLDPSGWELA LVTTPSNDIS AATERQLAGG LDTLTLNSLY DDGALRAAQQ PAYGVPASNP FEVQDLFAFS DSVSPPSAVN
501: NPFGLYEPTY HQQEQQPQLQ VAPSPANPFG DFGEFPIVPV SEPQSTTSFG AFPVPVSEPS NTTGFGEIPV VPVTEPPNTT AFGEFPVVPV SEPQNITGFG
601: ALPVTPASEP SNTTGFGEFP VVSVSAPQNT TGFGALPVIP VSEPSKTTGL GEFPVVPVSE PQNTTGFGEF PVNAGAHEQH NSNNPFGSTG FL
Arabidopsis Description
Putative clathrin assembly protein At1g14910 [Source:UniProtKB/Swiss-Prot;Acc:P94017]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.