Factsheet for AT2G01600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024871.1-P	Field mustard	cytosol	88.62	88.62
CDY17660	Canola	cytosol	88.62	88.62
CDY36239	Canola	cytosol	88.27	88.27
CDY17459	Canola	cytosol	87.22	87.37
CDY04095	Canola	cytosol	86.34	86.34
Bra017439.1-P	Field mustard	cytosol	86.34	86.34
CDY09433	Canola	cytosol, mitochondrion	86.87	85.96
CDY48813	Canola	cytosol	87.74	85.93
KRH42533	Soybean	cytosol	73.56	73.94
KRH58627	Soybean	nucleus	73.38	73.64
VIT_01s0011g05330.t01	Wine grape	cytosol, mitochondrion	70.93	71.43
Solyc04g007860.2.1	Tomato	cytosol, plastid	69.88	70.87
PGSC0003DMT400075923	Potato	cytosol	69.88	70.87
KRH38239	Soybean	cytosol	68.3	70.4
Bra026647.1-P	Field mustard	cytosol	86.16	68.33
GSMUA_Achr4P13420_001	Banana	cytosol	61.12	65.36
EES19899	Sorghum	cytosol, mitochondrion, plastid	63.92	64.72
GSMUA_Achr9P21890_001	Banana	cytosol	63.4	64.64
Zm00001d038892_P001	Maize	mitochondrion	63.4	64.3
Os05t0549000-01	Rice	plasma membrane	63.4	63.84
TraesCS1D01G375800.1	Wheat	cytosol, mitochondrion, plastid	62.87	63.54
TraesCS1A01G369700.1	Wheat	cytosol, mitochondrion, plastid	62.7	63.36
TraesCS1B01G388800.1	Wheat	cytosol, mitochondrion, plastid	62.35	63.12
Os01t0694900-01	Rice	cytosol	61.47	61.8
EES01312	Sorghum	cytosol	60.6	61.46
AT1G14910.1	Thale cress	mitochondrion	74.43	61.42
TraesCS3B01G292000.2	Wheat	cytosol, mitochondrion, plastid	60.25	61.21
TraesCS3A01G258900.1	Wheat	cytosol	59.72	61.0
TraesCS3D01G259000.2	Wheat	cytosol	59.72	60.57
Zm00001d009452_P007	Maize	cytosol, mitochondrion, plastid	58.49	57.39
HORVU1Hr1G078340.3	Barley	plastid	62.52	56.4
Zm00001d043773_P003	Maize	cytosol	58.67	53.43
AT5G57200.1	Thale cress	cytosol	54.47	52.62
AT4G25940.1	Thale cress	cytosol	54.12	51.41
AT5G35200.2	Thale cress	cytosol	44.48	46.69
AT1G03050.1	Thale cress	cytosol, mitochondrion	29.6	28.21
AT4G02650.1	Thale cress	mitochondrion	29.6	27.66
AT4G32285.2	Thale cress	cytosol	29.95	26.93
AT2G25430.1	Thale cress	cytosol	30.3	26.49
AT1G25240.2	Thale cress	mitochondrion	15.59	23.61
AT1G33340.1	Thale cress	cytosol, mitochondrion, nucleus	15.06	22.99
AT1G68110.1	Thale cress	mitochondrion	15.24	22.96
AT1G14686.1	Thale cress	cytosol	12.96	21.83
AT2G01920.1	Thale cress	mitochondrion	11.56	21.15
AT1G05020.1	Thale cress	cytosol	23.64	20.67

Protein Annotations

Gene3D:1.20.58.150	Gene3D:1.25.40.90	MapMan:22.1.6.2	EntrezGene:814689	ProteinID:AAD12692.3	ProteinID:AAM15059.1
ProteinID:AEC05472.1	EMBL:AF424593	InterPro:ANTH_dom	ArrayExpress:AT2G01600	EnsemblPlantsGene:AT2G01600	RefSeq:AT2G01600
TAIR:AT2G01600	RefSeq:AT2G01600-TAIR-G	EnsemblPlants:AT2G01600.1	TAIR:AT2G01600.1	EMBL:AY087211	EMBL:AY096639
EMBL:AY133828	Unigene:At.13456	InterPro:Clathrin_AP_dom2	InterPro:ENTH	InterPro:ENTH_VHS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005543	GO:GO:0005545	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005886	GO:GO:0005905	GO:GO:0006810
GO:GO:0006897	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0030136	GO:GO:0030276	GO:GO:0031410	GO:GO:0048268	InterPro:IPR008942	InterPro:IPR013809
InterPro:IPR014712	RefSeq:NP_565267.1	PFAM:PF07651	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	PFscan:PS50942	PANTHER:PTHR22951	PANTHER:PTHR22951:SF54	UniProt:Q8LBH2	SMART:SM00273
SUPFAM:SSF48464	SUPFAM:SSF89009	UniParc:UPI00000A7637	SEG:seg	:	:

Description

Putative clathrin assembly protein At2g01600 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBH2]

Coordinates

chr2:+:268714..272676

Molecular Weight (calculated)

63632.3 Da

IEP (calculated)

4.907

GRAVY (calculated)

-0.513

Length

571 amino acids

Sequence
(BLAST)

001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.