Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024871.1-P | Field mustard | cytosol | 99.3 | 99.3 |
| CDY36239 | Canola | cytosol | 98.42 | 98.42 |
| CDY09433 | Canola | cytosol, mitochondrion | 92.47 | 91.51 |
| CDY17459 | Canola | cytosol | 91.07 | 91.23 |
| CDY48813 | Canola | cytosol | 92.99 | 91.08 |
| CDY04095 | Canola | cytosol | 90.02 | 90.02 |
| AT2G01600.1 | Thale cress | cytosol, mitochondrion | 88.62 | 88.62 |
| KRH42533 | Soybean | cytosol | 74.78 | 75.18 |
| KRH58627 | Soybean | nucleus | 74.61 | 74.87 |
| VIT_01s0011g05330.t01 | Wine grape | cytosol, mitochondrion | 71.1 | 71.6 |
| KRH38239 | Soybean | cytosol | 68.48 | 70.58 |
| Solyc04g007860.2.1 | Tomato | cytosol, plastid | 69.35 | 70.34 |
| PGSC0003DMT400075923 | Potato | cytosol | 69.18 | 70.16 |
| CDY42239 | Canola | cytosol | 39.93 | 67.66 |
| GSMUA_Achr4P13420_001 | Banana | cytosol | 60.95 | 65.17 |
| EES19899 | Sorghum | cytosol, mitochondrion, plastid | 64.1 | 64.89 |
| Zm00001d038892_P001 | Maize | mitochondrion | 63.92 | 64.83 |
| GSMUA_Achr9P21890_001 | Banana | cytosol | 63.05 | 64.29 |
| Os05t0549000-01 | Rice | plasma membrane | 63.75 | 64.2 |
| TraesCS1D01G375800.1 | Wheat | cytosol, mitochondrion, plastid | 62.52 | 63.19 |
| TraesCS1B01G388800.1 | Wheat | cytosol, mitochondrion, plastid | 62.35 | 63.12 |
| Os01t0694900-01 | Rice | cytosol | 62.7 | 63.03 |
| TraesCS1A01G369700.1 | Wheat | cytosol, mitochondrion, plastid | 62.35 | 63.01 |
| TraesCS3B01G292000.2 | Wheat | cytosol, mitochondrion, plastid | 61.12 | 62.1 |
| TraesCS3A01G258900.1 | Wheat | cytosol | 60.77 | 62.08 |
| EES01312 | Sorghum | cytosol | 61.12 | 61.99 |
| TraesCS3D01G259000.2 | Wheat | cytosol | 60.6 | 61.46 |
| CDY45299 | Canola | mitochondrion | 71.28 | 59.16 |
| CDY53525 | Canola | cytosol, mitochondrion | 71.8 | 58.82 |
| Zm00001d009452_P007 | Maize | cytosol, mitochondrion, plastid | 58.67 | 57.56 |
| HORVU1Hr1G078340.3 | Barley | plastid | 62.52 | 56.4 |
| CDY47927 | Canola | cytosol | 48.86 | 55.25 |
| Zm00001d043773_P003 | Maize | cytosol | 59.19 | 53.91 |
| CDY52732 | Canola | cytosol | 54.82 | 53.5 |
| CDY38276 | Canola | cytosol | 55.17 | 53.21 |
| CDY41768 | Canola | cytosol, mitochondrion | 36.95 | 53.02 |
| CDY71126 | Canola | cytosol, mitochondrion | 38.7 | 51.88 |
| CDX94400 | Canola | cytosol | 52.89 | 50.67 |
| CDX89382 | Canola | cytosol | 53.06 | 50.42 |
| CDY12401 | Canola | cytosol, mitochondrion | 45.36 | 47.96 |
| CDY15448 | Canola | mitochondrion | 29.07 | 29.02 |
| CDX76976 | Canola | cytosol | 29.77 | 28.67 |
| CDY35361 | Canola | cytosol | 29.6 | 28.6 |
| CDY11530 | Canola | cytosol | 28.9 | 28.45 |
| CDY32494 | Canola | mitochondrion | 28.37 | 28.32 |
| CDX68831 | Canola | cytosol | 28.37 | 27.41 |
| CDY22070 | Canola | mitochondrion | 28.9 | 27.41 |
| CDY21904 | Canola | mitochondrion | 28.72 | 27.38 |
| CDX75232 | Canola | cytosol | 28.37 | 27.32 |
| CDY64692 | Canola | mitochondrion | 16.46 | 24.8 |
| CDY12691 | Canola | mitochondrion | 15.76 | 24.73 |
| CDY18283 | Canola | cytosol, nucleus, peroxisome | 20.67 | 24.58 |
| CDX81471 | Canola | mitochondrion | 15.76 | 24.46 |
| CDX89917 | Canola | cytosol | 19.96 | 24.31 |
| CDY03862 | Canola | mitochondrion | 16.11 | 24.15 |
| CDY18145 | Canola | cytosol | 19.61 | 24.03 |
| CDY45281 | Canola | cytosol | 14.19 | 23.62 |
| CDY50184 | Canola | mitochondrion | 15.06 | 23.37 |
| CDY01884 | Canola | mitochondrion | 14.54 | 23.25 |
| CDY60368 | Canola | mitochondrion | 15.24 | 23.02 |
| CDY41097 | Canola | cytosol | 13.84 | 22.97 |
| CDX93766 | Canola | mitochondrion | 14.89 | 22.91 |
| CDX96047 | Canola | mitochondrion | 14.36 | 22.71 |
| CDY57160 | Canola | mitochondrion | 14.89 | 22.49 |
| CDY15531 | Canola | cytosol, golgi, nucleus | 22.94 | 21.48 |
| CDY53396 | Canola | cytosol | 22.24 | 21.34 |
| CDX76977 | Canola | cytosol | 19.26 | 21.07 |
| CDX86594 | Canola | cytosol, golgi, nucleus | 23.82 | 20.92 |
| CDX76760 | Canola | cytosol | 16.81 | 20.56 |
| CDY37444 | Canola | nucleus | 8.58 | 17.44 |
| CDX86691 | Canola | cytosol, mitochondrion | 29.42 | 16.62 |
Protein Annotations
| Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | MapMan:22.1.6.2 | GO:A0A078FSZ9 | UniProt:A0A078FSZ9 | InterPro:ANTH_dom |
| EnsemblPlants:CDY17660 | ProteinID:CDY17660 | ProteinID:CDY17660.1 | InterPro:Clathrin_AP_dom2 | InterPro:ENTH | InterPro:ENTH_VHS |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008289 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0030136 | GO:GO:0030276 | GO:GO:0048268 | EnsemblPlantsGene:GSBRNA2T00001875001 | InterPro:IPR008942 |
| InterPro:IPR013809 | InterPro:IPR014712 | PFAM:PF07651 | PFscan:PS50942 | PANTHER:PTHR22951 | PANTHER:PTHR22951:SF54 |
| SMART:SM00273 | SUPFAM:SSF48464 | SUPFAM:SSF89009 | UniParc:UPI0004EECB62 | SEG:seg | : |
Description
BnaA06g34790DBnaA06g34790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSZ9]
Coordinates
chrLK032076:-:411847..415850
Molecular Weight (calculated)
63501.7 Da
IEP (calculated)
4.790
GRAVY (calculated)
-0.420
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTLQSWRKA YGALKDTTKV GLVRVNSDYA DLDVAIVKAT NHVECPPKDR HLRKIFAATA VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRARIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKST PGQDKGYSRT RDLDGEELLV QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMP KHEAMTSLEI YKRAGQQARS LSEFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRAVDVPMPL LLTYRPDDGL PIEDAEPSHE EREVVLNTDD VVLVSEETEP SPPPPPSANI QSQNIIDTDD LLGLNTAAPD ASAIEEQNAL
401: ALAVIPTDGN PPTPSFGQTN NYDPSGWELA LVTTPSNDIS AATDRQLAGG LDTLTLNSLY DDGAYIASQR PVYGAPAPNP FEVHDPFATS NSTPPPQQPA
501: VSNPFGSYQP TYQPQQQQLQ LAFPNPPANN NPFGDFGDFP VNPVSQQPNT SGFGDFAVNQ HNNPFRSTGL L
101: EGDPTFREEL LNFSQRARIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKST PGQDKGYSRT RDLDGEELLV QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMP KHEAMTSLEI YKRAGQQARS LSEFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRAVDVPMPL LLTYRPDDGL PIEDAEPSHE EREVVLNTDD VVLVSEETEP SPPPPPSANI QSQNIIDTDD LLGLNTAAPD ASAIEEQNAL
401: ALAVIPTDGN PPTPSFGQTN NYDPSGWELA LVTTPSNDIS AATDRQLAGG LDTLTLNSLY DDGAYIASQR PVYGAPAPNP FEVHDPFATS NSTPPPQQPA
501: VSNPFGSYQP TYQPQQQQLQ LAFPNPPANN NPFGDFGDFP VNPVSQQPNT SGFGDFAVNQ HNNPFRSTGL L
001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I
Arabidopsis Description
Putative clathrin assembly protein At2g01600 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBH2]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.