Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76976 | Canola | cytosol | 98.65 | 98.31 |
| CDY11530 | Canola | cytosol | 89.17 | 90.86 |
| Bra034252.1-P | Field mustard | cytosol | 99.32 | 90.45 |
| CDX76977 | Canola | cytosol | 75.97 | 86.02 |
| CDX68831 | Canola | cytosol | 84.77 | 84.77 |
| AT2G25430.1 | Thale cress | cytosol | 93.57 | 84.69 |
| CDX75232 | Canola | cytosol | 84.94 | 84.65 |
| CDX76760 | Canola | cytosol | 65.14 | 82.44 |
| KRH52429 | Soybean | endoplasmic reticulum | 81.22 | 74.88 |
| KRH05593 | Soybean | cytosol | 10.66 | 73.26 |
| KRH61760 | Soybean | mitochondrion | 80.37 | 72.85 |
| VIT_04s0008g05540.t01 | Wine grape | cytosol | 78.85 | 70.29 |
| PGSC0003DMT400040963 | Potato | cytosol | 76.14 | 70.2 |
| PGSC0003DMT400035762 | Potato | cytosol | 75.3 | 69.64 |
| Solyc08g059660.1.1 | Tomato | cytosol | 74.62 | 69.34 |
| TraesCS4D01G208100.1 | Wheat | cytosol, mitochondrion, plastid | 65.65 | 69.29 |
| Zm00001d030399_P001 | Maize | cytosol | 40.44 | 68.29 |
| Solyc06g011450.1.1 | Tomato | cytosol | 70.73 | 68.08 |
| Zm00001d046121_P001 | Maize | cytosol | 41.79 | 68.04 |
| TraesCS4B01G207200.1 | Wheat | cytosol, mitochondrion, plastid | 69.2 | 64.11 |
| Zm00001d047804_P001 | Maize | plasma membrane | 68.7 | 64.04 |
| Os03t0275500-01 | Rice | plasma membrane | 70.39 | 63.9 |
| EER92480 | Sorghum | cytosol, mitochondrion, plastid | 69.71 | 63.88 |
| GSMUA_Achr9P03950_001 | Banana | cytosol, mitochondrion, plastid | 56.85 | 63.76 |
| TraesCS4A01G097200.1 | Wheat | cytosol, mitochondrion, plastid | 68.7 | 63.64 |
| Zm00001d028620_P001 | Maize | plasma membrane | 68.36 | 63.22 |
| HORVU4Hr1G059660.3 | Barley | cytosol, mitochondrion, plastid | 69.04 | 63.16 |
| GSMUA_Achr11P... | Banana | cytosol | 45.52 | 58.99 |
| GSMUA_Achr6P33420_001 | Banana | cytosol, mitochondrion, plastid | 57.02 | 53.32 |
| Os05t0112101-01 | Rice | plasma membrane | 52.28 | 53.18 |
| TraesCS1A01G035100.1 | Wheat | cytosol | 54.65 | 52.44 |
| TraesCS1D01G036500.1 | Wheat | cytosol | 54.82 | 52.43 |
| TraesCS1B01G044800.1 | Wheat | cytosol | 54.65 | 52.27 |
| HORVU1Hr1G005290.1 | Barley | cytosol | 53.81 | 51.46 |
| Zm00001d035652_P001 | Maize | cytosol | 48.73 | 48.24 |
| EES18894 | Sorghum | cytosol | 50.59 | 47.99 |
| CDY15448 | Canola | mitochondrion | 45.35 | 46.85 |
| CDY32494 | Canola | mitochondrion | 44.5 | 45.98 |
| CDY21904 | Canola | mitochondrion | 45.18 | 44.57 |
| CDY22070 | Canola | mitochondrion | 45.18 | 44.35 |
| CDX89917 | Canola | cytosol | 33.16 | 41.79 |
| CDY18145 | Canola | cytosol | 32.83 | 41.63 |
| CDY37444 | Canola | nucleus | 18.78 | 39.5 |
| CDY42239 | Canola | cytosol | 19.8 | 34.72 |
| CDY18283 | Canola | cytosol, nucleus, peroxisome | 26.9 | 33.12 |
| CDY41768 | Canola | cytosol, mitochondrion | 22.17 | 32.91 |
| CDY71126 | Canola | cytosol, mitochondrion | 23.52 | 32.63 |
| CDY52732 | Canola | cytosol | 29.78 | 30.09 |
| CDY53396 | Canola | cytosol | 30.29 | 30.08 |
| CDY15531 | Canola | cytosol, golgi, nucleus | 30.96 | 30.0 |
| CDY12401 | Canola | cytosol, mitochondrion | 27.41 | 30.0 |
| CDY38276 | Canola | cytosol | 29.78 | 29.73 |
| CDY17660 | Canola | cytosol | 28.6 | 29.6 |
| CDY09433 | Canola | cytosol, mitochondrion | 28.76 | 29.46 |
| CDY04095 | Canola | cytosol | 28.43 | 29.42 |
| CDY36239 | Canola | cytosol | 28.26 | 29.25 |
| CDY17459 | Canola | cytosol | 28.09 | 29.12 |
| CDY47927 | Canola | cytosol | 24.87 | 29.11 |
| CDY48813 | Canola | cytosol | 28.6 | 28.99 |
| CDX89382 | Canola | cytosol | 28.93 | 28.45 |
| CDX94400 | Canola | cytosol | 28.6 | 28.36 |
| CDX86594 | Canola | cytosol, golgi, nucleus | 29.78 | 27.08 |
| CDY03862 | Canola | mitochondrion | 17.43 | 27.03 |
| CDY57160 | Canola | mitochondrion | 17.26 | 26.98 |
| CDY64692 | Canola | mitochondrion | 17.26 | 26.91 |
| CDY60368 | Canola | mitochondrion | 17.09 | 26.72 |
| CDX93766 | Canola | mitochondrion | 16.58 | 26.42 |
| CDY50184 | Canola | mitochondrion | 16.41 | 26.36 |
| CDX86691 | Canola | cytosol, mitochondrion | 44.67 | 26.11 |
| CDX81471 | Canola | mitochondrion | 15.57 | 25.0 |
| CDY12691 | Canola | mitochondrion | 15.4 | 25.0 |
| CDY53525 | Canola | cytosol, mitochondrion | 29.1 | 24.68 |
| CDY45299 | Canola | mitochondrion | 28.6 | 24.56 |
| CDY01884 | Canola | mitochondrion | 14.72 | 24.37 |
| CDY41097 | Canola | cytosol | 14.04 | 24.13 |
| CDY45281 | Canola | cytosol | 13.87 | 23.91 |
| CDX96047 | Canola | mitochondrion | 14.38 | 23.55 |
Protein Annotations
| Gene3D:1.20.58.150 | Gene3D:1.25.40.90 | MapMan:22.1.4.6 | MapMan:22.1.6.2 | GO:A0A078HC73 | UniProt:A0A078HC73 |
| InterPro:ANTH_dom | EnsemblPlants:CDY35361 | ProteinID:CDY35361 | ProteinID:CDY35361.1 | InterPro:Clathrin_AP_dom2 | InterPro:ENTH |
| InterPro:ENTH_VHS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005543 | GO:GO:0005545 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008289 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030136 | GO:GO:0030276 | GO:GO:0048268 | EnsemblPlantsGene:GSBRNA2T00058336001 |
| InterPro:IPR008942 | InterPro:IPR013809 | InterPro:IPR014712 | PFAM:PF07651 | PFscan:PS50942 | PANTHER:PTHR22951 |
| PANTHER:PTHR22951:SF13 | SMART:SM00273 | SUPFAM:SSF48464 | SUPFAM:SSF89009 | UniParc:UPI0004EF2C9B | SEG:seg |
Description
BnaA04g14860DBnaA04g14860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC73]
Coordinates
chrLK032350:-:301664..304277
Molecular Weight (calculated)
65161.4 Da
IEP (calculated)
4.868
GRAVY (calculated)
-0.460
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSIRKAIG AVKDQTSIGI AKVASNTAPD LEVAIVKATS HDDDPASEKY IREILNLTSL SRGYILACVT SVSRRLGKTR DWVVALKALM LVHRLLNEGD
101: PLFQEEILHS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAFYLDQRLE LALFERKSGG GDMNEMGGGG RDEKKAVTPL PEMTPERIFG KMGHLQRLLD
201: RFLTLRPTGL AKNSRMILIA LYPVVRESFK LYADICEVLA VLLDKFFDME YTDCVKAFDA YASAAKQIDE LIAFYNWCKE TGVARSSEYP EVQRITSKLL
301: ETLEEFVRDR AKRGKSPERK EIEAPPPPPP VAEEEEPDMN EIKALPPPES YTPPPQPEPE PEKPQYTEDL VNLREDGVTG DDQGNKFALA LFAGPPGSNG
401: KWEAFPSDGV TSAWQNPAAE PGKADWELAL VETASNLEKQ TAALGGGFDS LLLNGMYDQG AVRQHVSTSE LTGGSASSVA LPLPGKANTQ ILALPAPDGT
501: VEKVNQDPFA ASLTIPPPSY VQMAEMEKKQ YLLSQEQQLW QQYQREGMRG QASLAKMNNT GPVPGGMPYG MPPVNGMGPP PPTGYYYNNP Y
101: PLFQEEILHS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAFYLDQRLE LALFERKSGG GDMNEMGGGG RDEKKAVTPL PEMTPERIFG KMGHLQRLLD
201: RFLTLRPTGL AKNSRMILIA LYPVVRESFK LYADICEVLA VLLDKFFDME YTDCVKAFDA YASAAKQIDE LIAFYNWCKE TGVARSSEYP EVQRITSKLL
301: ETLEEFVRDR AKRGKSPERK EIEAPPPPPP VAEEEEPDMN EIKALPPPES YTPPPQPEPE PEKPQYTEDL VNLREDGVTG DDQGNKFALA LFAGPPGSNG
401: KWEAFPSDGV TSAWQNPAAE PGKADWELAL VETASNLEKQ TAALGGGFDS LLLNGMYDQG AVRQHVSTSE LTGGSASSVA LPLPGKANTQ ILALPAPDGT
501: VEKVNQDPFA ASLTIPPPSY VQMAEMEKKQ YLLSQEQQLW QQYQREGMRG QASLAKMNNT GPVPGGMPYG MPPVNGMGPP PPTGYYYNNP Y
001: MAPSIRKAIG AVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDPASEKY IREILNLTSL SRGYILACVT SVSRRLSKTR DWVVALKALM LVHRLLNEGD
101: PIFQEEILYS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAGYLDQRLE LALFERKSGV SVNSGGNSSH HSNNDDRYGR GRDDFRSPPP RSYDYENGGG
201: GGSDFRGDNN GYGGVPKRSR SYGDMTEMGG GGGGGGRDEK KVVTPLREMT PERIFGKMGH LQRLLDRFLS LRPTGLAKNS RMILIALYPV VRESFKLYAD
301: ICEVLAVLLD KFFDMEYSDC VKAFDAYASA AKQIDELIAF YNWCKETGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRG KSPERKEIEA PPPVVEEEEP
401: EPDMNEIKAL PPPENYTPPP PPEPEPQPEK PQFTEDLVNL REDEVTADDQ GNKFALALFA GPPGNNGKWE AFSSNGVTSA WQNPAAEPGK ADWELALVET
501: TSNLEKQTAA LGGGFDNLLL NGMYDQGMVR QHVSTSQLTG GSASSVALPL PGKTNNQVLA LPAPDGTVEK VNQDPFAASL TIPPPSYVQM AEMEKKQYLL
601: SQEQQLWQQY QRDGMRGQAS LAKMNTGPVP AYGMPPVNGM GPPPTGYYYN NPY
101: PIFQEEILYS TRRGTRMLNM SDFRDEAHSS SWDHSAFVRT YAGYLDQRLE LALFERKSGV SVNSGGNSSH HSNNDDRYGR GRDDFRSPPP RSYDYENGGG
201: GGSDFRGDNN GYGGVPKRSR SYGDMTEMGG GGGGGGRDEK KVVTPLREMT PERIFGKMGH LQRLLDRFLS LRPTGLAKNS RMILIALYPV VRESFKLYAD
301: ICEVLAVLLD KFFDMEYSDC VKAFDAYASA AKQIDELIAF YNWCKETGVA RSSEYPEVQR ITSKLLETLE EFVRDRAKRG KSPERKEIEA PPPVVEEEEP
401: EPDMNEIKAL PPPENYTPPP PPEPEPQPEK PQFTEDLVNL REDEVTADDQ GNKFALALFA GPPGNNGKWE AFSSNGVTSA WQNPAAEPGK ADWELALVET
501: TSNLEKQTAA LGGGFDNLLL NGMYDQGMVR QHVSTSQLTG GSASSVALPL PGKTNNQVLA LPAPDGTVEK VNQDPFAASL TIPPPSYVQM AEMEKKQYLL
601: SQEQQLWQQY QRDGMRGQAS LAKMNTGPVP AYGMPPVNGM GPPPTGYYYN NPY
Arabidopsis Description
Putative clathrin assembly protein At2g25430 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF20]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.